CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58301	Soybean	cytosol	94.59	94.59
KRH72270	Soybean	cytosol	24.53	90.08
VIT_12s0055g00910.t01	Wine grape	cytosol	69.23	69.52
PGSC0003DMT400032733	Potato	cytosol, plastid	65.9	66.74
Solyc01g104980.2.1	Tomato	cytosol, plastid	65.9	66.74
KRH53131	Soybean	cytosol	60.08	60.71
GSMUA_Achr6P04050_001	Banana	cytosol	57.38	60.66
KRH18847	Soybean	cytosol	59.88	60.63
KRH62415	Soybean	cytosol	34.51	60.14
KRH16647	Soybean	cytosol, plastid	59.04	59.54
Os02t0574900-01	Rice	cytosol	55.3	57.83
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	54.89	57.39
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	54.26	57.24
EES05304	Sorghum	cytosol, peroxisome, plastid	54.47	57.08
HORVU6Hr1G052010.1	Barley	cytosol	54.05	56.52
Os10t0363600-01	Rice	cytosol, plastid	55.3	56.0
TraesCS7D01G016400.1	Wheat	cytosol, plastid	51.98	54.82
KXG24326	Sorghum	cytosol	53.22	54.7
TraesCS7A01G020100.1	Wheat	cytosol, plastid	51.56	54.39
TraesCS4A01G472100.1	Wheat	cytosol	51.35	53.93
HORVU7Hr1G002140.2	Barley	mitochondrion	51.77	52.2
GSMUA_Achr10P...	Banana	cytosol	55.93	51.73
Zm00001d049632_P001	Maize	cytosol	50.52	50.73
KRH55297	Soybean	cytosol	27.23	44.71
GSMUA_Achr2P22090_001	Banana	cytosol	34.72	44.3
KRG93237	Soybean	cytosol	25.57	28.74
KRH56558	Soybean	cytosol	25.36	28.5
KRH67237	Soybean	cytosol	20.37	28.41
KRH71403	Soybean	cytosol	20.17	28.2
KRH32035	Soybean	cytosol	20.17	28.2
KRG93186	Soybean	cytosol	23.28	28.14
KRG95556	Soybean	cytosol	20.17	28.12
KRH11716	Soybean	cytosol, golgi, plastid	21.62	27.96
KRG97442	Soybean	cytosol, nucleus, peroxisome	21.0	27.3
KRH31463	Soybean	cytosol	21.62	27.01
KRH42654	Soybean	cytosol	21.41	26.55
KRH48156	Soybean	cytosol	19.96	26.52
KRH58897	Soybean	cytosol	23.08	25.4
KRH48154	Soybean	cytosol	19.33	25.27
KRH11179	Soybean	mitochondrion, plastid	21.21	25.19
KRH42810	Soybean	cytosol	22.87	25.17
KRH26429	Soybean	cytosol	18.92	25.0
KRH36711	Soybean	cytosol	20.79	24.81
KRH21075	Soybean	mitochondrion	20.79	24.69
KRH48153	Soybean	cytosol	18.5	24.59
KRH61941	Soybean	plastid	17.67	24.22
KRH65052	Soybean	cytosol	16.01	24.06
KRH22905	Soybean	cytosol	19.33	23.91
KRH65051	Soybean	cytosol	16.22	23.78
KRH12864	Soybean	cytosol, plasma membrane	15.59	23.08
KRH52601	Soybean	extracellular, golgi	18.92	22.81
KRH24879	Soybean	cytosol	18.5	22.42
KRH29930	Soybean	cytosol	15.38	21.33
KRH57678	Soybean	cytosol	17.26	21.07
KRH54527	Soybean	cytosol	18.92	20.63
KRH56929	Soybean	cytosol	17.26	20.39
KRH03453	Soybean	cytosol	17.26	20.34
KRG94518	Soybean	mitochondrion	16.84	20.2
KRH63378	Soybean	cytosol	18.5	20.18
KRH06951	Soybean	cytosol	16.42	19.55
KRH74828	Soybean	cytosol	19.13	17.13
KRH70694	Soybean	cytosol	18.92	16.88
KRH45883	Soybean	cytosol	18.92	16.88
KRG99114	Soybean	cytosol	18.3	16.33

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100785702	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02004791	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_08G074400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1KR50
InterPro:IPR001810	InterPro:IPR015915	ProteinID:KRH42189.1	EnsemblPlants:KRH42190	ProteinID:KRH42190	ProteinID:KRH42190.1
ProteinID:KRH42191.1	ProteinID:KRH42192.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344
PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF45	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI0001CABD37	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:5675190..5681927

Molecular Weight (calculated)

53643.3 Da

IEP (calculated)

6.017

GRAVY (calculated)

-0.189

Length

481 amino acids

Sequence
(BLAST)

001: MGNILNLNNS KTRRNDSHGV LQGESCKRQR LSPNSCEDNP RLIPSLPDEI SIQILARVPR IYYLNLKLVC RAWKETFVSS ELFCVRKELG SMEEWLYILT
101: KVNDDKLLWY ALDPLSRRWQ KLPPMPKVGF EDETKKGLIS FPLRMWSMMG SSIRIVDVIM SWLGRRDALD WMPFCGCSIG AVDGCIYALG GFSRASAMKY
201: VWQYDPIKNS WAEASPMSVG RAYCKTGILN NKLYVVGGVT RGRGGLSPLQ SAEVYDPHTG MWSLLPSMPF ARAQVLPTAF LADLLKPIAT GMASYKGRLF
301: VPQSLYCWPF FVDVGGEVYD PNLNSWLEMP IGMGEGWPAR QAGTKLSVTV DDDLYALDPS NSLDSAKIKV YDYEGDTWKV AAGDVPIHDF TESESPYLLA
401: GLLGKLHVIT KDANHNITVL QADMQNEHAE SAFSQSILSS PDNSISEDAE SSAETQGEFW KVLATRSGRS AELVNCQSLK I

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.