Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032733 | Potato | cytosol, plastid | 96.42 | 96.42 |
| VIT_12s0055g00910.t01 | Wine grape | cytosol | 67.16 | 66.6 |
| KRH42190 | Soybean | cytosol, plastid | 66.74 | 65.9 |
| KRH58301 | Soybean | cytosol | 65.47 | 64.66 |
| GSMUA_Achr6P04050_001 | Banana | cytosol | 58.74 | 61.32 |
| EES05304 | Sorghum | cytosol, peroxisome, plastid | 56.42 | 58.39 |
| Os02t0574900-01 | Rice | cytosol | 56.21 | 58.04 |
| Zm00001d050862_P001 | Maize | cytosol, peroxisome, plastid | 54.95 | 57.24 |
| TraesCS6B01G227500.1 | Wheat | cytosol, peroxisome, plastid | 55.37 | 57.17 |
| Os10t0363600-01 | Rice | cytosol, plastid | 57.05 | 57.05 |
| KXG24326 | Sorghum | cytosol | 56.21 | 57.05 |
| TraesCS7D01G016400.1 | Wheat | cytosol, plastid | 54.53 | 56.8 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 54.53 | 56.8 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 54.74 | 56.77 |
| HORVU6Hr1G052010.1 | Barley | cytosol | 53.47 | 55.22 |
| HORVU7Hr1G002140.2 | Barley | mitochondrion | 54.11 | 53.88 |
| GSMUA_Achr10P... | Banana | cytosol | 57.89 | 52.88 |
| Zm00001d049632_P001 | Maize | cytosol | 51.79 | 51.36 |
| GSMUA_Achr2P22090_001 | Banana | cytosol | 32.63 | 41.11 |
| Solyc07g042960.1.1 | Tomato | cytosol, mitochondrion | 10.74 | 28.98 |
| Solyc06g008690.1.1 | Tomato | cytosol | 19.79 | 27.25 |
| Solyc01g005970.2.1 | Tomato | cytosol | 24.84 | 27.0 |
| Solyc09g065400.1.1 | Tomato | cytosol | 19.58 | 26.96 |
| Solyc02g021600.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 22.53 | 26.62 |
| Solyc01g022740.2.1 | Tomato | cytosol | 24.42 | 26.54 |
| Solyc04g005670.1.1 | Tomato | cytosol | 20.21 | 23.76 |
| Solyc11g069320.1.1 | Tomato | plastid | 10.74 | 23.39 |
| Solyc01g094520.2.1 | Tomato | nucleus | 18.74 | 22.31 |
| Solyc03g113010.1.1 | Tomato | cytosol | 20.0 | 21.54 |
| Solyc04g005870.1.1 | Tomato | cytosol | 2.32 | 20.75 |
| Solyc07g042950.1.1 | Tomato | cytosol | 6.53 | 17.42 |
| Solyc05g007220.2.1 | Tomato | nucleus | 19.58 | 14.44 |
| Solyc07g009410.2.1 | Tomato | cytosol | 13.47 | 14.35 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:2.120.10.80 | MapMan:35.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR015915 | UniProt:K4B270 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | PFAM:PF01344 | PFAM:PF12937 | PFscan:PS50181 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF45 |
| SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | EnsemblPlantsGene:Solyc01g104980.2 | EnsemblPlants:Solyc01g104980.2.1 |
| UniParc:UPI0002768D78 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:93299263..93301295
Molecular Weight (calculated)
52265.5 Da
IEP (calculated)
7.034
GRAVY (calculated)
-0.190
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGILSRSNH NSNVGDLIEG SQSASCKRQR TSDSFWEHSP RLIPSLPDEI SIQILARLPR THHLNAKLVS ASWKAAIMSP ELYRCRKELG TTEEWLYLLT
101: KTEGDKFLWY AFDPISMRWQ KLPPMPAIAV NDEPRSGLSG LRAWNMAGSS MRIADAIRGW LGRKSALDQV PFCGCAIGAV DGCLYALGGF FRAAAMRSVW
201: RYDPIVNAWN EVSPMSTARA YCKTGVLNGK LYVVGGVTRD RGGLTPLQSA EVFNPHTGIW SEVPSMPFSK AQMLPTAFLA DLLKPIATGM TSYRGKLYVP
301: QSLYCWPFFV DVGGEVYDPE TNAWIEMPLG MGDGWPARQA GTKLSVTVEG ELYALDPSST LDSARIKVYD HQNDTWKVIE GDIPINDNSE SPYLLAGFLG
401: KLHVITKDAN HNIMVMQADK QNHSAPSPST SANSLQKNLH EVPEPVLGSE ANMWRVVALR SGGSAELVSC QILDV
101: KTEGDKFLWY AFDPISMRWQ KLPPMPAIAV NDEPRSGLSG LRAWNMAGSS MRIADAIRGW LGRKSALDQV PFCGCAIGAV DGCLYALGGF FRAAAMRSVW
201: RYDPIVNAWN EVSPMSTARA YCKTGVLNGK LYVVGGVTRD RGGLTPLQSA EVFNPHTGIW SEVPSMPFSK AQMLPTAFLA DLLKPIATGM TSYRGKLYVP
301: QSLYCWPFFV DVGGEVYDPE TNAWIEMPLG MGDGWPARQA GTKLSVTVEG ELYALDPSST LDSARIKVYD HQNDTWKVIE GDIPINDNSE SPYLLAGFLG
401: KLHVITKDAN HNIMVMQADK QNHSAPSPST SANSLQKNLH EVPEPVLGSE ANMWRVVALR SGGSAELVSC QILDV
001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI
Arabidopsis Description
F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.