Factsheet for Solyc01g022740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400034149	Potato	cytosol	98.4	98.4
Solyc01g005970.2.1	Tomato	cytosol	88.56	88.56
VIT_06s0004g00860.t01	Wine grape	cytosol	85.58	85.58
KRH58897	Soybean	cytosol	80.55	80.55
KRH42810	Soybean	cytosol	80.55	80.55
AT1G55270.1	Thale cress	mitochondrion	77.35	77.88
Bra011908.1-P	Field mustard	mitochondrion	76.43	76.78
CDY26117	Canola	cytosol	76.43	76.78
CDY08233	Canola	mitochondrion	76.2	76.55
CDY02451	Canola	cytosol	75.74	76.09
CDY10574	Canola	cytosol	75.74	76.09
Bra030872.1-P	Field mustard	cytosol	75.51	75.86
GSMUA_Achr7P27010_001	Banana	cytosol	67.96	71.39
GSMUA_Achr3P29560_001	Banana	cytosol	67.05	71.29
EER91632	Sorghum	plastid	70.94	70.94
CDY33062	Canola	mitochondrion, plastid	70.25	70.57
CDY24045	Canola	mitochondrion	69.79	70.11
Zm00001d032991_P001	Maize	cytosol	70.02	70.02
Os10t0409900-01	Rice	plastid	70.71	69.91
Bra037989.1-P	Field mustard	cytosol, plastid	69.57	69.89
TraesCS4D01G282200.1	Wheat	cytosol	66.13	69.3
TraesCS1B01G154600.1	Wheat	plastid	69.34	69.18
Os03t0167800-02	Rice	cytosol	68.42	68.26
TraesCS4A01G020200.1	Wheat	cytosol	66.59	67.67
TraesCS4B01G283400.1	Wheat	cytosol	66.36	67.44
EER95442	Sorghum	mitochondrion	67.51	67.35
TraesCS4B01G283500.1	Wheat	cytosol	65.68	66.59
HORVU4Hr1G074720.7	Barley	plasma membrane	66.82	66.51
TraesCS3D01G540000.1	Wheat	cytosol	64.53	66.04
TraesCS3B01G611700.1	Wheat	cytosol	64.53	66.04
KRH11716	Soybean	cytosol, golgi, plastid	56.06	65.86
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	66.13	65.83
TraesCS3A01G534600.1	Wheat	cytosol	64.07	64.97
TraesCS1D01G136700.1	Wheat	nucleus	68.88	64.45
HORVU1Hr1G035200.1	Barley	plasma membrane	68.42	62.95
KRH36711	Soybean	cytosol	54.92	59.55
HORVU3Hr1G116690.2	Barley	mitochondrion	64.99	58.32
GSMUA_Achr4P03630_001	Banana	plasma membrane	61.78	31.8
Solyc02g021600.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	25.4	27.61
Solyc07g042960.1.1	Tomato	cytosol, mitochondrion	10.3	25.57
Solyc01g104980.2.1	Tomato	cytosol, plastid	26.54	24.42
Solyc09g065400.1.1	Tomato	cytosol	18.54	23.48
Solyc06g008690.1.1	Tomato	cytosol	18.54	23.48
Solyc01g094520.2.1	Tomato	nucleus	21.28	23.31
Solyc11g069320.1.1	Tomato	plastid	10.53	21.1
Solyc04g005670.1.1	Tomato	cytosol	18.76	20.3
Solyc03g113010.1.1	Tomato	cytosol	18.31	18.14
Solyc07g042950.1.1	Tomato	cytosol	6.41	15.73
Solyc04g005870.1.1	Tomato	cytosol	1.83	15.09
Solyc05g007220.2.1	Tomato	nucleus	19.45	13.2
Solyc07g009410.2.1	Tomato	cytosol	13.27	13.0

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:2.120.10.80	MapMan:9.2.1.1.3	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031463	InterPro:IPR001810	InterPro:IPR015915	UniProt:K4AV56
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344	PFAM:PF13964	PFscan:PS50181
PANTHER:PTHR24412	PANTHER:PTHR24412:SF234	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
EnsemblPlantsGene:Solyc01g022740.2	EnsemblPlants:Solyc01g022740.2.1	UniParc:UPI0002762F4A	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:-:32850498..32855494

Molecular Weight (calculated)

49503.7 Da

IEP (calculated)

10.082

GRAVY (calculated)

-0.300

Length

437 amino acids

Sequence
(BLAST)

001: MDQTIERSSN AHRGFRVQPP LVDSVSCYCN VDSGLKTVAG ARKFVPGSKL CIQSDISSHA HKSKNSRRER SRVQPPLLPS LPDDLAIACL VRVPRVELSK
101: LRLVCKRWYR LLAGNFFYSQ RKSLGMAEEW VYVVKRDRDG RITWHAFDPT YQLWQPLPPV PGDYGEALGF GCAVLSGCHL YLFGGKDPIK GSMRRVIFYN
201: ARTNRWHRAP DMLRKRHFFG SCVINNCLYV AGGECEGIQR TLRSAEVYDP NRKRWSFIAD MSTAMVPFIG VVYDGKWFIK GLGSHREVLS ESYSPDTNAW
301: SPVNNRMVAG WRNPSISMNG RLYALDCRDG CKLRVYDEST QSWIRFIDSK LHLGSSRALE AAALVPLNGK LCIIRNNMSI SIIDVSSPDK RVETNPRLWE
401: NIAGKGHFRT MFTNLWSSIS GRAGLKSHIV HCQVLQV

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.