Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P29560_001 | Banana | cytosol | 87.5 | 88.56 |
| Os10t0409900-01 | Rice | plastid | 76.2 | 71.72 |
| EER91632 | Sorghum | plastid | 75.0 | 71.4 |
| PGSC0003DMT400081852 | Potato | cytosol | 74.28 | 70.71 |
| TraesCS1B01G154600.1 | Wheat | plastid | 74.28 | 70.55 |
| Zm00001d032991_P001 | Maize | cytosol | 74.04 | 70.48 |
| Solyc01g005970.2.1 | Tomato | cytosol | 74.04 | 70.48 |
| VIT_06s0004g00860.t01 | Wine grape | cytosol | 73.8 | 70.25 |
| Os03t0167800-02 | Rice | cytosol | 73.8 | 70.09 |
| KRH58897 | Soybean | cytosol | 73.32 | 69.79 |
| KRH42810 | Soybean | cytosol | 73.08 | 69.57 |
| Bra011908.1-P | Field mustard | mitochondrion | 72.6 | 69.43 |
| AT1G55270.1 | Thale cress | mitochondrion | 72.36 | 69.35 |
| TraesCS3B01G611700.1 | Wheat | cytosol | 71.15 | 69.32 |
| TraesCS4D01G282200.1 | Wheat | cytosol | 69.47 | 69.3 |
| CDY26117 | Canola | cytosol | 72.36 | 69.2 |
| CDY08233 | Canola | mitochondrion | 72.12 | 68.97 |
| PGSC0003DMT400034149 | Potato | cytosol | 72.36 | 68.88 |
| CDY10574 | Canola | cytosol | 71.88 | 68.74 |
| TraesCS3D01G540000.1 | Wheat | cytosol | 70.43 | 68.62 |
| CDY02451 | Canola | cytosol | 71.63 | 68.51 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 70.67 | 68.37 |
| Bra030872.1-P | Field mustard | cytosol | 71.39 | 68.28 |
| Solyc01g022740.2.1 | Tomato | cytosol | 71.39 | 67.96 |
| TraesCS4B01G283400.1 | Wheat | cytosol | 69.95 | 67.67 |
| TraesCS4B01G283500.1 | Wheat | cytosol | 69.47 | 67.05 |
| HORVU4Hr1G074720.7 | Barley | plasma membrane | 70.67 | 66.97 |
| CDY24045 | Canola | mitochondrion | 69.71 | 66.67 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 68.99 | 66.59 |
| GSMUA_Achr7P08330_001 | Banana | cytosol | 62.98 | 66.5 |
| Bra037989.1-P | Field mustard | cytosol, plastid | 69.23 | 66.21 |
| CDY33062 | Canola | mitochondrion, plastid | 68.99 | 65.98 |
| EER95442 | Sorghum | mitochondrion | 69.23 | 65.75 |
| TraesCS1D01G136700.1 | Wheat | nucleus | 73.8 | 65.74 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 68.75 | 65.15 |
| GSMUA_Achr2P17100_001 | Banana | cytosol, plastid | 63.46 | 64.71 |
| HORVU1Hr1G035200.1 | Barley | plasma membrane | 73.56 | 64.42 |
| KRH11716 | Soybean | cytosol, golgi, plastid | 53.85 | 60.22 |
| HORVU3Hr1G116690.2 | Barley | mitochondrion | 70.19 | 59.96 |
| KRH36711 | Soybean | cytosol | 51.92 | 53.6 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 73.32 | 35.92 |
| GSMUA_Achr6P31190_001 | Banana | mitochondrion | 26.2 | 26.52 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 23.08 | 25.13 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 22.12 | 23.96 |
| GSMUA_Achr2P22090_001 | Banana | cytosol | 21.39 | 23.61 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 21.88 | 23.33 |
| GSMUA_Achr6P04050_001 | Banana | cytosol | 24.76 | 22.64 |
| GSMUA_Achr6P24370_001 | Banana | cytosol | 18.75 | 22.48 |
| GSMUA_Achr4P20790_001 | Banana | extracellular | 19.23 | 21.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.79 | 20.73 |
| GSMUA_Achr9P30470_001 | Banana | cytosol | 18.27 | 19.44 |
| GSMUA_Achr4P09990_001 | Banana | cytosol | 19.47 | 18.88 |
| GSMUA_Achr3P23350_001 | Banana | cytosol, extracellular | 18.27 | 18.86 |
| GSMUA_Achr10P... | Banana | cytosol | 23.56 | 18.85 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 17.07 | 18.68 |
| GSMUA_Achr7P20970_001 | Banana | cytosol | 17.07 | 17.97 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 16.11 | 17.77 |
| GSMUA_Achr4P00520_001 | Banana | cytosol | 16.35 | 17.48 |
| GSMUA_Achr11P... | Banana | cytosol | 18.27 | 17.27 |
| GSMUA_Achr2P18470_001 | Banana | cytosol | 17.55 | 17.14 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 16.11 | 16.11 |
| GSMUA_Achr10P... | Banana | nucleus | 16.83 | 16.09 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 18.03 | 15.34 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 17.07 | 14.85 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 17.55 | 14.12 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:9.2.1.1.3 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr7G27010_001 | EnsemblPlants:GSMUA_Achr7P27010_001 | EnsemblPlants:GSMUA_Achr7T27010_001 | InterPro:IPR001810 | InterPro:IPR015915 |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | UniProt:M0TL37 | PFAM:PF00646 | PFAM:PF01344 | PFAM:PF13964 |
| PANTHER:PTHR24412 | PANTHER:PTHR24412:SF234 | SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 |
| UniParc:UPI00029520F7 | SEG:seg | : | : | : | : |
Description
F-box/kelch-repeat protein At1g55270 [Source:GMGC_GENE;Acc:GSMUA_Achr7G27010_001]
Coordinates
chr7:-:28189809..28195726
Molecular Weight (calculated)
46995.8 Da
IEP (calculated)
10.193
GRAVY (calculated)
-0.311
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRAAPERLA GSHRVVRVQA PLVDSVSCYC RVDAGLKTVV GARKFVPGAK LCLQPEIIPN GPRLRNSRRE RSRNQAPLLP GLPDDLAIAC LIRVPRIEHQ
101: NLRLVCKRWN RLLSGNYYYS LRKKLGMAEE WVYVIKRDRG KISWHAFDPN HRLWRPLPPV PADYSEAFGF GCAVLSGCYL YLFGGKDPSK GPMRRVVFYN
201: ARTNKWHRAP DMLRKRHLFG SCVINNCLYV AGGECEGNQR TLRSAELYDP NRNRWISIAE MSIGMVPFIG VVYEGKWFLK GIDSRHQVVS EVYAPTTNTW
301: STVDCRDGCK LRVYERATDS WNKFMDSKHH LGNSKAFEAA SFVPLNGKLG IIRNNMSISL VDVTNPVNSI ETNSSHVWEA ISGKNQLKSF VANLWSSIAG
401: RSGLKGHIVH CQVLQA
101: NLRLVCKRWN RLLSGNYYYS LRKKLGMAEE WVYVIKRDRG KISWHAFDPN HRLWRPLPPV PADYSEAFGF GCAVLSGCYL YLFGGKDPSK GPMRRVVFYN
201: ARTNKWHRAP DMLRKRHLFG SCVINNCLYV AGGECEGNQR TLRSAELYDP NRNRWISIAE MSIGMVPFIG VVYEGKWFLK GIDSRHQVVS EVYAPTTNTW
301: STVDCRDGCK LRVYERATDS WNKFMDSKHH LGNSKAFEAA SFVPLNGKLG IIRNNMSISL VDVTNPVNSI ETNSSHVWEA ISGKNQLKSF VANLWSSIAG
401: RSGLKGHIVH CQVLQA
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.