Factsheet for Zm00001d032991_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91632	Sorghum	plastid	96.11	96.11
Os10t0409900-01	Rice	plastid	90.62	89.59
TraesCS1B01G154600.1	Wheat	plastid	88.79	88.58
TraesCS1D01G136700.1	Wheat	nucleus	88.79	83.08
HORVU1Hr1G035200.1	Barley	plasma membrane	88.1	81.05
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	75.51	75.17
GSMUA_Achr7P27010_001	Banana	cytosol	70.48	74.04
GSMUA_Achr3P29560_001	Banana	cytosol	68.42	72.75
VIT_06s0004g00860.t01	Wine grape	cytosol	71.4	71.4
Solyc01g005970.2.1	Tomato	cytosol	71.4	71.4
PGSC0003DMT400081852	Potato	cytosol	71.17	71.17
Bra011908.1-P	Field mustard	mitochondrion	70.25	70.57
CDY26117	Canola	cytosol	70.25	70.57
CDY08233	Canola	mitochondrion	70.25	70.57
AT1G55270.1	Thale cress	mitochondrion	69.79	70.28
PGSC0003DMT400034149	Potato	cytosol	70.25	70.25
CDY02451	Canola	cytosol	69.79	70.11
CDY10574	Canola	cytosol	69.79	70.11
Solyc01g022740.2.1	Tomato	cytosol	70.02	70.02
Bra030872.1-P	Field mustard	cytosol	69.57	69.89
KRH42810	Soybean	cytosol	68.88	68.88
KRH58897	Soybean	cytosol	68.88	68.88
CDY33062	Canola	mitochondrion, plastid	67.05	67.36
CDY24045	Canola	mitochondrion	66.59	66.9
Bra037989.1-P	Field mustard	cytosol, plastid	66.36	66.67
KRH11716	Soybean	cytosol, golgi, plastid	50.11	58.87
Zm00001d015744_P001	Maize	plastid	50.57	52.87
KRH36711	Soybean	cytosol	48.51	52.61
GSMUA_Achr4P03630_001	Banana	plasma membrane	62.24	32.04
Zm00001d016553_P001	Maize	cytosol	21.51	25.82
Zm00001d049632_P001	Maize	cytosol	27.23	24.84
Zm00001d018813_P001	Maize	mitochondrion	23.11	24.63
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	25.63	24.56
Zm00001d014986_P001	Maize	cytosol	19.45	23.42
Zm00001d014338_P001	Maize	cytosol	18.08	22.7
Zm00001d027856_P001	Maize	cytosol	21.74	22.14
Zm00001d046921_P001	Maize	cytosol	19.91	22.08
Zm00001d048310_P001	Maize	cytosol	21.51	21.96
Zm00001d033012_P001	Maize	cytosol	22.2	21.75
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	21.97	21.67
Zm00001d046922_P001	Maize	cytosol	18.99	21.56
Zm00001d048898_P001	Maize	cytosol	20.37	20.46
Zm00001d052253_P001	Maize	cytosol	19.45	20.09
Zm00001d026321_P001	Maize	cytosol	20.59	20.09
Zm00001d007596_P001	Maize	nucleus, plastid	19.68	19.5
Zm00001d002284_P003	Maize	mitochondrion	20.82	18.65
Zm00001d007538_P001	Maize	cytosol	10.3	15.15
Zm00001d019862_P001	Maize	cytosol	19.68	12.57

Protein Annotations

Gene3D:2.120.10.80	MapMan:9.2.1.1.3	EMBL:BT066254	UniProt:C0PD85	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	ProteinID:ONM06574.1	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412	PANTHER:PTHR24412:SF234
SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000194B1DE	EnsemblPlantsGene:Zm00001d032991	EnsemblPlants:Zm00001d032991_P001
EnsemblPlants:Zm00001d032991_T001	SEG:seg	:	:	:	:

Description

F-box/kelch-repeat protein

Coordinates

chr1:+:246031572..246034941

Molecular Weight (calculated)

49731.1 Da

IEP (calculated)

9.898

GRAVY (calculated)

-0.367

Length

437 amino acids

Sequence
(BLAST)

001: MDAASRPPPP HGTGVRVRAP LVESVSCYCR LDTGLKTVVE ARKFVPGAKM CMQPEVKQNK RKSRGSKKER CRTQAPLLPG LPDDLAIACL IRVPRLEQPK
101: LRMVCKRWNR LLSGNYFYSL RKKIGVAEEW VYVFKRDREG KISWYAFDPL HQLWKSLPPV PQEYSEALGF GCAVLSGCYL YLFGGKDPLR GSMRRVVFYN
201: ARTNKWHRAP DMMRKRHFFG SCVINNCLYV AGGECEGIQR TLQSAEVYDP NRNRWACVTE MNNGMVPFIG VVYDGKWFLK GLDSHRQVTS EVYLPSSNTW
301: SAIDDEMVTG WRNPSISFNG RLYSADCRDG CKLRVYDENT GTWTRFMDSK HHLGSSRAFE AAALVSLNGK LCVIRNNMSI TLVDVSNPTM SVETDSARMW
401: ETVVRKGQHR SFVANLWSSI AGRNLKSHII HCHVLQV

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.