Factsheet for Zm00001d027827_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, mitochondrion

Predictor Summary:

mitochondrion 2
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95442	Sorghum	mitochondrion	95.22	95.43
Os03t0167800-02	Rice	cytosol	80.41	80.59
TraesCS4D01G282200.1	Wheat	cytosol	76.31	80.34
TraesCS4A01G020200.1	Wheat	cytosol	76.99	78.6
TraesCS4B01G283400.1	Wheat	cytosol	76.54	78.14
TraesCS4B01G283500.1	Wheat	cytosol	75.63	77.03
TraesCS3B01G611700.1	Wheat	cytosol	74.49	76.58
HORVU4Hr1G074720.7	Barley	plasma membrane	76.54	76.54
TraesCS3D01G540000.1	Wheat	cytosol	74.26	76.35
Zm00001d032991_P001	Maize	cytosol	75.17	75.51
TraesCS3A01G534600.1	Wheat	cytosol	73.12	74.48
GSMUA_Achr7P27010_001	Banana	cytosol	65.15	68.75
GSMUA_Achr3P29560_001	Banana	cytosol	63.55	67.88
HORVU3Hr1G116690.2	Barley	mitochondrion	74.94	67.56
PGSC0003DMT400034149	Potato	cytosol	66.29	66.59
VIT_06s0004g00860.t01	Wine grape	cytosol	66.29	66.59
Solyc01g005970.2.1	Tomato	cytosol	66.06	66.36
PGSC0003DMT400081852	Potato	cytosol	66.06	66.36
Solyc01g022740.2.1	Tomato	cytosol	65.83	66.13
KRH58897	Soybean	cytosol	65.15	65.45
KRH42810	Soybean	cytosol	64.92	65.22
CDY08233	Canola	mitochondrion	64.46	65.06
AT1G55270.1	Thale cress	mitochondrion	64.01	64.75
Bra011908.1-P	Field mustard	mitochondrion	64.01	64.6
CDY26117	Canola	cytosol	64.01	64.6
CDY10574	Canola	cytosol	63.33	63.91
CDY02451	Canola	cytosol	63.33	63.91
Bra030872.1-P	Field mustard	cytosol	63.1	63.68
CDY33062	Canola	mitochondrion, plastid	60.36	60.92
CDY24045	Canola	mitochondrion	60.14	60.69
Bra037989.1-P	Field mustard	cytosol, plastid	59.23	59.77
KRH11716	Soybean	cytosol, golgi, plastid	47.84	56.45
KRH36711	Soybean	cytosol	46.47	50.62
Zm00001d015744_P001	Maize	plastid	46.24	48.56
GSMUA_Achr4P03630_001	Banana	plasma membrane	58.77	30.39
Zm00001d016553_P001	Maize	cytosol	20.96	25.27
Zm00001d049632_P001	Maize	cytosol	26.42	24.22
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	25.06	24.12
Zm00001d014986_P001	Maize	cytosol	19.82	23.97
Zm00001d018813_P001	Maize	mitochondrion	22.32	23.9
Zm00001d046921_P001	Maize	cytosol	19.36	21.57
Zm00001d046922_P001	Maize	cytosol	18.91	21.56
Zm00001d014338_P001	Maize	cytosol	17.08	21.55
Zm00001d027856_P001	Maize	cytosol	20.27	20.75
Zm00001d048310_P001	Maize	cytosol	19.36	19.86
Zm00001d048898_P001	Maize	cytosol	19.59	19.77
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	19.82	19.64
Zm00001d033012_P001	Maize	cytosol	19.82	19.51
Zm00001d007596_P001	Maize	nucleus, plastid	19.59	19.5
Zm00001d052253_P001	Maize	cytosol	18.45	19.15
Zm00001d026321_P001	Maize	cytosol	19.36	18.97
Zm00001d002284_P003	Maize	mitochondrion	19.82	17.83
Zm00001d007538_P001	Maize	cytosol	9.57	14.14
Zm00001d019862_P001	Maize	cytosol	19.13	12.28

Protein Annotations

EntrezGene:100281098	Gene3D:2.120.10.80	MapMan:9.2.1.1.3	UniProt:B6SS62	EMBL:EU955577	InterPro:F-box-like_dom_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
ProteinID:ONL94069.1	PFAM:PF01344	PANTHER:PTHR24412	PANTHER:PTHR24412:SF234	SMART:SM00612	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI000182AD8A	EnsemblPlantsGene:Zm00001d027827	EnsemblPlants:Zm00001d027827_P001	EnsemblPlants:Zm00001d027827_T001	SEG:seg

Description

Kelch motif family protein

Coordinates

chr1:+:14612107..14616020

Molecular Weight (calculated)

49757.5 Da

IEP (calculated)

10.313

GRAVY (calculated)

-0.291

Length

439 amino acids

Sequence
(BLAST)

001: MRAAAGDAPP RRAGGIRVRV PLVESVSCHC RVDGGLKTVV SARKFVPGAK LCMQPDIIPN KRKSRSSRKE RSKTQSPLLP GLPDELAISC LMRAARIEHP
101: NMRLVCKRWN RLLSGNYYYS LRKKFGMAEE WIYVFKRDRD QKLSWYAFDP VNQLWKSLPP VPPEYSEAVG FGSAVLNGCY LYLFGGKDPV HGSMRRVVFY
201: NARINKWLRA PDMLQKRHFF GSCVINNCLY VAGGECVGIQ RILRSAEVYD PNRNRWSSIA EMSTGMVPSI GVVHDGKWYL KGLNSHRQVV SEVYLPASKM
301: WSATGNEMVT GWRNPSISLN GHLYSADCRD GCKLRVYNRE MGSWTRFIDT RHHMGSSRSL EAAAFVSLNG KLCIIRNNMS ITIVDILDPT TATEVDSARM
401: WEAFARKGQH RSSFMANLWL IITGRNLKTD IMHCQVLQV

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.