Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P00520_001 | Banana | cytosol | 85.32 | 86.63 |
| GSMUA_Achr4P09990_001 | Banana | cytosol | 81.52 | 75.06 |
| CDY33755 | Canola | cytosol | 20.25 | 65.04 |
| Solyc04g005870.1.1 | Tomato | cytosol | 8.61 | 64.15 |
| KXG30756 | Sorghum | cytosol | 68.86 | 64.0 |
| Zm00001d052253_P001 | Maize | cytosol | 67.85 | 63.36 |
| TraesCS6B01G334300.1 | Wheat | cytosol, nucleus, plastid | 68.1 | 63.29 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 67.85 | 63.06 |
| HORVU6Hr1G075590.1 | Barley | cytosol, nucleus, plastid | 67.85 | 63.06 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 67.85 | 63.06 |
| Os02t0748300-01 | Rice | cytosol | 67.34 | 62.44 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 60.0 | 62.37 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 58.73 | 61.54 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 61.77 | 58.65 |
| GSMUA_Achr10P... | Banana | nucleus | 62.53 | 56.78 |
| VIT_17s0000g05920.t01 | Wine grape | cytosol | 62.53 | 55.76 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 65.06 | 53.77 |
| Solyc04g005670.1.1 | Tomato | cytosol | 54.68 | 53.47 |
| PGSC0003DMT400007346 | Potato | nucleus | 58.23 | 53.12 |
| CDX81631 | Canola | nucleus | 54.94 | 53.06 |
| Bra026838.1-P | Field mustard | nucleus | 54.43 | 52.83 |
| KRH54527 | Soybean | cytosol | 58.23 | 52.15 |
| CDY62015 | Canola | nucleus | 54.68 | 52.05 |
| KRH63378 | Soybean | cytosol | 57.72 | 51.7 |
| AT1G14330.1 | Thale cress | nucleus | 57.47 | 51.47 |
| CDY49094 | Canola | nucleus | 54.68 | 50.94 |
| Solyc03g113010.1.1 | Tomato | cytosol | 56.71 | 50.79 |
| Bra017407.1-P | Field mustard | nucleus, plastid | 56.2 | 50.57 |
| CDY60836 | Canola | cytosol | 48.1 | 50.0 |
| CDY09349 | Canola | nucleus | 56.2 | 50.0 |
| Bra026575.1-P | Field mustard | nucleus | 56.2 | 50.0 |
| KRH03453 | Soybean | cytosol | 51.39 | 49.75 |
| CDY62176 | Canola | nucleus | 56.2 | 49.66 |
| CDY45190 | Canola | nucleus | 56.46 | 49.23 |
| CDY17425 | Canola | cytosol | 49.87 | 49.13 |
| Bra024801.1-P | Field mustard | nucleus | 56.2 | 49.01 |
| CDY03028 | Canola | cytosol | 55.7 | 49.0 |
| PGSC0003DMT400046591 | Potato | extracellular | 56.46 | 48.9 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 63.8 | 48.74 |
| AT2G02870.1 | Thale cress | nucleus | 57.47 | 48.61 |
| KRH56929 | Soybean | cytosol | 48.86 | 47.42 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 57.97 | 46.83 |
| CDY33754 | Canola | nucleus | 29.37 | 46.4 |
| CDY46430 | Canola | cytosol | 49.87 | 46.24 |
| Bra016297.1-P | Field mustard | cytosol | 49.62 | 46.01 |
| CDY52764 | Canola | cytosol | 49.37 | 45.88 |
| AT1G26930.1 | Thale cress | cytosol | 48.86 | 45.84 |
| GSMUA_Achr3P23350_001 | Banana | cytosol, extracellular | 46.58 | 45.66 |
| PGSC0003DMT400059324 | Potato | cytosol | 54.68 | 45.0 |
| CDY16205 | Canola | nucleus | 47.85 | 44.68 |
| KRG99114 | Soybean | cytosol | 59.49 | 43.6 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 59.49 | 43.44 |
| KRH45883 | Soybean | cytosol | 59.24 | 43.41 |
| GSMUA_Achr9P30470_001 | Banana | cytosol | 41.52 | 41.94 |
| KRH70694 | Soybean | cytosol | 56.96 | 41.74 |
| KRH74828 | Soybean | cytosol | 56.71 | 41.71 |
| PGSC0003DMT400007391 | Potato | cytosol | 13.67 | 40.3 |
| GSMUA_Achr11P... | Banana | cytosol | 42.78 | 38.41 |
| Solyc05g007220.2.1 | Tomato | nucleus | 52.15 | 31.99 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 11.9 | 29.75 |
| GSMUA_Achr6P24370_001 | Banana | cytosol | 16.71 | 19.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.96 | 18.77 |
| GSMUA_Achr6P04050_001 | Banana | cytosol | 20.25 | 17.58 |
| GSMUA_Achr4P20790_001 | Banana | extracellular | 16.46 | 17.24 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 16.71 | 17.19 |
| GSMUA_Achr7P27010_001 | Banana | cytosol | 17.97 | 17.07 |
| GSMUA_Achr7P08330_001 | Banana | cytosol | 16.96 | 17.01 |
| GSMUA_Achr3P29560_001 | Banana | cytosol | 17.47 | 16.79 |
| GSMUA_Achr6P31190_001 | Banana | mitochondrion | 17.47 | 16.79 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 15.44 | 15.97 |
| GSMUA_Achr2P17100_001 | Banana | cytosol, plastid | 15.95 | 15.44 |
| GSMUA_Achr2P22090_001 | Banana | cytosol | 14.68 | 15.38 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 14.94 | 15.13 |
| GSMUA_Achr10P... | Banana | cytosol | 19.49 | 14.81 |
| GSMUA_Achr2P18470_001 | Banana | cytosol | 15.19 | 14.08 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 16.96 | 7.89 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P20970_001 | EnsemblPlants:GSMUA_Achr7T20970_001 | EnsemblPlantsGene:GSMUA_Achr7G20970_001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 |
| PFAM:PF01344 | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI000295CAAD | UniProt:M0TJD4 | MapMan:35.1 |
Description
F-box/kelch-repeat protein SKIP11 [Source:GMGC_GENE;Acc:GSMUA_Achr7G20970_001]
Coordinates
chr7:+:23882734..23885616
Molecular Weight (calculated)
44209.8 Da
IEP (calculated)
5.701
GRAVY (calculated)
-0.233
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MLESQSFLIS RALPSSCEQE SKLAYMTYHL LEITTNKRPT IVESLELNEA AMIKKAKSAD DLGPPFQEEK ALPLDESNYN GQHSDTNSLI GQIGCDMSIK
101: CLLHCSRSDF GALASLNRAF NSLFRTGELY KLRRQTGIIE HWVYFSCNIL EWEAYDPYCG RWITLPKMPQ NDFFMRSDKE SLAVGTELLV FGRDYTSRIA
201: HIVLRYSILT NSWSQGIEMN SPRCLFGSAS FGEVAIVAGG VFMDNKFYVI GGMRSPTELL TCGEEYDTER HSWRVIPNMS LGLNGPSGAP PLVAVVNNEL
301: YAADYAEKEV RKYDKENNSW VTLGRLPERP DSVNGWGLAF RACGDRLLVI GGPRVLGGGM IELNSWTPRD GPPEWNLIAR KHCGSFVYNC AVMGC
101: CLLHCSRSDF GALASLNRAF NSLFRTGELY KLRRQTGIIE HWVYFSCNIL EWEAYDPYCG RWITLPKMPQ NDFFMRSDKE SLAVGTELLV FGRDYTSRIA
201: HIVLRYSILT NSWSQGIEMN SPRCLFGSAS FGEVAIVAGG VFMDNKFYVI GGMRSPTELL TCGEEYDTER HSWRVIPNMS LGLNGPSGAP PLVAVVNNEL
301: YAADYAEKEV RKYDKENNSW VTLGRLPERP DSVNGWGLAF RACGDRLLVI GGPRVLGGGM IELNSWTPRD GPPEWNLIAR KHCGSFVYNC AVMGC
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.