Factsheet for GSMUA_Achr8P01380_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	81.84	71.49
GSMUA_Achr1P21630_001	Banana	cytosol	69.74	70.29
GSMUA_Achr8P17960_001	Banana	nucleus	73.42	67.07
TraesCS4D01G286700.1	Wheat	cytosol	57.11	65.76
GSMUA_Achr3P01570_001	Banana	golgi	79.21	61.55
CDY33755	Canola	cytosol	19.47	60.16
GSMUA_Achr7P20970_001	Banana	cytosol	62.37	60.0
GSMUA_Achr2P14920_001	Banana	mitochondrion	74.74	59.41
TraesCS4A01G493800.1	Wheat	cytosol	39.21	59.36
GSMUA_Achr4P00520_001	Banana	cytosol	60.0	58.61
Solyc04g005870.1.1	Tomato	cytosol	8.16	58.49
Zm00001d027856_P001	Maize	cytosol	63.68	56.41
GSMUA_Achr4P09990_001	Banana	cytosol	63.68	56.41
Os03t0171600-01	Rice	cytosol	63.95	56.38
KXG40080	Sorghum	cytosol	63.42	56.31
Zm00001d048310_P001	Maize	cytosol	63.16	56.07
TraesCS4A01G016200.1	Wheat	cytosol	62.89	55.45
GSMUA_Achr4P24130_001	Banana	nucleus	74.74	54.93
HORVU4Hr1G075310.1	Barley	cytosol	63.16	54.67
TraesCS7A01G004600.1	Wheat	cytosol	51.32	53.57
VIT_17s0000g05920.t01	Wine grape	cytosol	60.26	51.69
TraesCS7D01G007100.1	Wheat	cytosol	50.53	51.61
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	59.74	51.24
OQU91835	Sorghum	cytosol, nucleus, plastid	59.47	50.9
Zm00001d033012_P001	Maize	cytosol	59.74	50.9
Bra026838.1-P	Field mustard	nucleus	53.68	50.12
Solyc04g005670.1.1	Tomato	cytosol	53.16	50.0
KRH63378	Soybean	cytosol	57.89	49.89
CDX81631	Canola	nucleus	53.68	49.88
PGSC0003DMT400007346	Potato	nucleus	56.58	49.65
KRH54527	Soybean	cytosol	57.37	49.43
CDY62015	Canola	nucleus	53.95	49.4
TraesCS7D01G005100.1	Wheat	cytosol	27.89	49.3
Bra026575.1-P	Field mustard	nucleus	56.84	48.65
CDY09349	Canola	nucleus	56.84	48.65
CDY62176	Canola	nucleus	57.11	48.55
CDY60836	Canola	cytosol	48.42	48.42
AT1G14330.1	Thale cress	nucleus	55.79	48.07
TraesCS4A01G487800.1	Wheat	cytosol	32.63	48.06
KRH03453	Soybean	cytosol	51.58	48.04
CDY49094	Canola	nucleus	53.42	47.88
Bra017407.1-P	Field mustard	nucleus, plastid	55.26	47.84
AT1G26930.1	Thale cress	cytosol	52.63	47.51
CDY46430	Canola	cytosol	53.16	47.42
CDY52764	Canola	cytosol	52.89	47.29
Bra016297.1-P	Field mustard	cytosol	52.89	47.18
Solyc03g113010.1.1	Tomato	cytosol	54.74	47.17
CDY16205	Canola	nucleus	52.37	47.04
CDY17425	Canola	cytosol	49.21	46.63
Os11t0602800-01	Rice	nucleus	52.63	46.3
AT2G02870.1	Thale cress	nucleus	56.84	46.25
CDY45190	Canola	nucleus	54.74	45.92
Bra024801.1-P	Field mustard	nucleus	54.74	45.92
CDY03028	Canola	cytosol	54.21	45.88
PGSC0003DMT400046591	Potato	extracellular	54.74	45.61
KRH56929	Soybean	cytosol	47.89	44.72
HORVU2Hr1G057140.1	Barley	cytosol	21.84	44.62
HORVU2Hr1G057150.1	Barley	cytosol	21.84	44.62
Zm00001d007596_P001	Maize	nucleus, plastid	51.58	44.44
TraesCS4A01G489600.1	Wheat	cytosol	44.21	44.44
Zm00001d048898_P001	Maize	cytosol	50.79	44.37
TraesCS4A01G489300.1	Wheat	cytosol	44.21	44.09
PGSC0003DMT400059324	Potato	cytosol	55.53	43.96
OQU83795	Sorghum	cytosol	51.58	43.95
TraesCS4A01G492300.1	Wheat	cytosol, golgi, plastid	43.68	43.12
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	44.74	42.18
VIT_01s0026g02080.t01	Wine grape	nucleus	60.0	42.14
CDY33754	Canola	nucleus	26.84	40.8
KRH74828	Soybean	cytosol	57.63	40.78
KRH70694	Soybean	cytosol	57.63	40.63
KRH45883	Soybean	cytosol	57.37	40.45
KRG99114	Soybean	cytosol	57.11	40.26
GSMUA_Achr9P30470_001	Banana	cytosol	41.05	39.9
HORVU7Hr1G000010.5	Barley	cytosol	43.16	37.44
PGSC0003DMT400007391	Potato	cytosol	13.16	37.31
GSMUA_Achr11P...	Banana	cytosol	41.58	35.91
HORVU7Hr1G000070.1	Barley	cytosol	45.79	33.14
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	13.42	32.28
TraesCS4A01G491100.1	Wheat	cytosol	44.47	32.13
Solyc05g007220.2.1	Tomato	nucleus	53.68	31.68
TraesCS4A01G493200.1	Wheat	cytosol, plasma membrane	35.26	28.27
GSMUA_Achr6P04050_001	Banana	cytosol	23.42	19.56
GSMUA_Achr6P24370_001	Banana	cytosol	17.63	19.31
GSMUA_Achr4P20790_001	Banana	extracellular	18.95	19.1
GSMUA_Achr7P08330_001	Banana	cytosol	18.16	17.51
GSMUA_Achr8P28270_001	Banana	cytosol	17.63	17.45
GSMUA_Achr7P27010_001	Banana	cytosol	18.68	17.07
GSMUA_Achr2P22090_001	Banana	cytosol	16.84	16.98
GSMUA_Achr10P...	Banana	cytosol	23.16	16.92
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	16.84	16.75
GSMUA_Achr3P29560_001	Banana	cytosol	17.89	16.55
GSMUA_AchrUn_...	Banana	cytosol	15.53	16.53
GSMUA_Achr2P17100_001	Banana	cytosol, plastid	17.37	16.18
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	16.05	15.64
GSMUA_Achr6P31190_001	Banana	mitochondrion	16.58	15.33
GSMUA_Achr2P18470_001	Banana	cytosol	15.26	13.62
GSMUA_Achr4P03630_001	Banana	plasma membrane	17.11	7.66

Protein Annotations

EnsemblPlants:GSMUA_Achr8P01380_001	EnsemblPlants:GSMUA_Achr8T01380_001	EnsemblPlantsGene:GSMUA_Achr8G01380_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR24413
PANTHER:PTHR24413:SF133	PFAM:PF01344	SEG:seg	SUPFAM:SSF117281	UniParc:UPI0002955C05	UniProt:M0TLP0
MapMan:35.1	:	:	:	:	:

Description

F-box/kelch-repeat protein SKIP11 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01380_001]

Coordinates

chr8:+:1167941..1169384

Molecular Weight (calculated)

42367.1 Da

IEP (calculated)

5.051

GRAVY (calculated)

-0.284

Length

380 amino acids

Sequence
(BLAST)

001: MLEDRPYLIS RVFESTSEQE SNWSFLACHF HESLDSKKRL LDEELEEEEE EEEEERPLDD SNGSNNFNRL TGDIIINCLL HLSRSNYGAV ASVNHVFRSL
101: IRSGEVYQAR RQLGVTEHWV YFSCSALEWE AYDPYRGHWI RVPKMPGSPT ENFMLSDKES LAVGTELLVF GQELNSYIVQ RYSILTNSWS PGVVMNSPRC
201: LFGSASLDGK AIVAGGTHAR KMCSGVFMDG KFYVIGGIDS DNKVLTCGEE YDLKRCSWRL IPDMSAGLNG ASGAPPLVAV VNNELYAAHY ANKVVLKYNK
301: ENNTWVTLGK LPERSVSMNG WGLAFRACGE QLIVIGGQRG CHGGMIELNS WVPNGGPPEW DMIASKHSGS FVYNCAVMGC

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.