CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71403	Soybean	cytosol	98.55	98.55
KRH67237	Soybean	cytosol	88.08	87.83
KRG95556	Soybean	cytosol	86.92	86.67
VIT_07s0151g00770.t01	Wine grape	cytosol	81.4	81.16
Solyc09g065400.1.1	Tomato	cytosol	77.91	77.68
PGSC0003DMT400049746	Potato	cytosol	77.62	77.39
PGSC0003DMT400013635	Potato	cytosol	71.8	71.59
Solyc06g008690.1.1	Tomato	cytosol	71.51	71.3
CDX82306	Canola	cytosol	69.48	69.08
Bra001739.1-P	Field mustard	cytosol	69.19	68.79
CDY22982	Canola	cytosol	69.19	68.79
AT3G63220.2	Thale cress	cytosol	70.06	68.47
Bra037535.1-P	Field mustard	cytosol	68.02	67.44
CDX99248	Canola	cytosol	67.15	66.38
CDY18573	Canola	cytosol	66.86	66.09
CDY58259	Canola	cytosol	66.28	65.71
GSMUA_Achr6P24370_001	Banana	cytosol	65.12	64.55
Os10t0388200-01	Rice	cytosol	62.79	62.25
OQU82118	Sorghum	cytosol	62.21	61.49
TraesCS6B01G243200.1	Wheat	cytosol	63.08	61.47
Zm00001d014338_P001	Maize	cytosol	61.92	61.21
TraesCS6D01G195800.1	Wheat	cytosol	62.79	61.19
TraesCS7B01G234000.1	Wheat	cytosol	59.01	61.14
TraesCS6A01G211500.1	Wheat	extracellular, golgi	48.84	54.55
KRH11716	Soybean	cytosol, golgi, plastid	23.84	22.04
KRH61941	Soybean	plastid	22.09	21.65
KRH31463	Soybean	cytosol	24.13	21.56
KRG97442	Soybean	cytosol, nucleus, peroxisome	22.97	21.35
KRH56558	Soybean	cytosol	26.16	21.03
KRG93237	Soybean	cytosol	26.16	21.03
KRH48153	Soybean	cytosol	22.09	20.99
KRH52601	Soybean	extracellular, golgi	24.13	20.8
KRH11179	Soybean	mitochondrion, plastid	24.42	20.74
KRH48156	Soybean	cytosol	21.8	20.72
KRH42654	Soybean	cytosol	23.26	20.62
KRH21075	Soybean	mitochondrion	24.13	20.49
KRH26429	Soybean	cytosol	21.51	20.33
KRH42190	Soybean	cytosol, plastid	28.2	20.17
KRH58897	Soybean	cytosol	25.58	20.14
KRG93186	Soybean	cytosol	23.26	20.1
KRH58301	Soybean	cytosol	27.91	19.96
KRH42810	Soybean	cytosol	25.29	19.91
KRH12864	Soybean	cytosol, plasma membrane	18.6	19.69
KRH65051	Soybean	cytosol	18.6	19.51
KRH18847	Soybean	cytosol	26.74	19.37
KRH22905	Soybean	cytosol	21.8	19.28
KRH65052	Soybean	cytosol	17.73	19.06
KRH48154	Soybean	cytosol	20.35	19.02
KRH36711	Soybean	cytosol	22.09	18.86
KRH62415	Soybean	cytosol	14.83	18.48
KRH57678	Soybean	cytosol	20.93	18.27
KRH53131	Soybean	cytosol	25.0	18.07
KRH16647	Soybean	cytosol, plastid	25.0	18.03
KRH24879	Soybean	cytosol	20.64	17.88
KRH06951	Soybean	cytosol	20.93	17.82
KRG94518	Soybean	mitochondrion	20.35	17.46
KRH29930	Soybean	cytosol	17.44	17.29
KRH03453	Soybean	cytosol	20.35	17.16
KRH54527	Soybean	cytosol	20.93	16.33
KRH56929	Soybean	cytosol	18.9	15.97
KRH63378	Soybean	cytosol	20.35	15.87
KRH72270	Soybean	cytosol	5.81	15.27
KRH55297	Soybean	cytosol	12.5	14.68
KRH45883	Soybean	cytosol	20.35	12.99
KRH70694	Soybean	cytosol	20.35	12.99
KRH74828	Soybean	cytosol	20.06	12.85
HORVU6Hr1G007080.1	Barley	cytosol	3.2	12.64
KRG99114	Soybean	cytosol	19.48	12.43

Protein Annotations

EntrezGene:100814641	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02006093	EnsemblPlantsGene:GLYMA_10G028000	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	UniProt:I1L856	InterPro:IPR015915	EnsemblPlants:KRH32035	ProteinID:KRH32035
ProteinID:KRH32035.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF01344	PANTHER:PTHR24414	PANTHER:PTHR24414:SF29
SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000233CDE1	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:2435527..2439429

Molecular Weight (calculated)

38170.4 Da

IEP (calculated)

7.454

GRAVY (calculated)

0.030

Length

344 amino acids

Sequence
(BLAST)

001: MSGLIEGLPD AVAIRCLAWV PFYLHPKLEL VSRAWRAVVR GPELFKARQE LGSSEDLLCV CAFEPENLWQ LYDPQRDLWI TLPVLPSRIR HLSHFGAVST
101: AGKLFVIGGG SDAVDPLTGD QDGCFATNEV WSYDPVVRQW SPRAAMLVPR SMFACCVMNG KIVVAGGFTS CRKSISQAEI YDPEKDVWIP MPDLHRTHNS
201: ACSGVVIGGK VHVLHKDMST VQVLDNAGQW TVEEYGWLHG QMAVIRDALY VISHGLIIKQ DKKMRKVVGS ASEFRRRIGF AMIGLGDELY VIGGVIGPDR
301: WNWDIKPLSD VDVLTLASER PTWRQAAPMT RCGGTILGCT QLRI

Best Arabidopsis Sequence Match ( AT3G63220.1 )
(BLAST)

001: MSGLLDGIPE AVALRCLAHV PLHLHPNLEL VSRSWRAAIR SHELFRVRKE LRSSEHLLCV CAFDPENIWQ VYSPNCDRWL TLPLLPSRIR HLAHFGAVTT
101: AGMLFVLGGG SDAVSPVTGD HDGTFATDQV WSYDFVQRQW TPRASMLVPR AMFACCVLQG KIVVAGGFTT CRKSISGAEM YDPENDVWTS IPDLHQTHNS
201: ACSGLVVNGK VHVLHKGLST VQVLESVKLG WDVKDYGWPQ GPMVVVEDVL YVMSHGLVFK QEGDTWKMVA SASEFKRRIG MAMTSLSDEV LIVGGVIGPD
301: RLNWDIKPLS DVDALTVGND RPAWRSVAPM TRCRGTILGC TQLTI

Arabidopsis Description

SKIP30F-box/kelch-repeat protein SKIP30 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1W7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.