Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99882 | Canola | mitochondrion, plastid | 91.21 | 91.21 |
| CDY26295 | Canola | mitochondrion, plastid | 90.95 | 90.95 |
| Bra032358.1-P | Field mustard | mitochondrion, plastid | 90.95 | 90.95 |
| KRH11179 | Soybean | mitochondrion, plastid | 72.61 | 71.36 |
| KRH21075 | Soybean | mitochondrion | 72.61 | 71.36 |
| PGSC0003DMT400008228 | Potato | cytosol, mitochondrion, peroxisome, plastid | 65.83 | 65.17 |
| Solyc02g021600.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 65.58 | 64.93 |
| VIT_10s0003g03730.t01 | Wine grape | cytosol | 36.18 | 62.61 |
| Os07t0153400-01 | Rice | mitochondrion | 58.79 | 57.64 |
| TraesCS2A01G499700.1 | Wheat | cytosol, mitochondrion | 56.28 | 56.28 |
| TraesCS2D01G499800.1 | Wheat | mitochondrion | 56.78 | 55.8 |
| GSMUA_Achr6P31190_001 | Banana | mitochondrion | 57.54 | 55.72 |
| Zm00001d018813_P001 | Maize | mitochondrion | 57.29 | 55.61 |
| EER97991 | Sorghum | mitochondrion | 57.79 | 55.56 |
| AT2G24540.1 | Thale cress | cytosol | 33.17 | 35.48 |
| AT1G55270.1 | Thale cress | mitochondrion | 25.63 | 23.5 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 20.35 | 23.41 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 22.11 | 23.4 |
| AT3G63220.2 | Thale cress | cytosol | 20.35 | 23.01 |
| AT3G61350.2 | Thale cress | cytosol | 19.35 | 21.51 |
| AT5G60570.2 | Thale cress | cytosol | 20.6 | 20.87 |
| AT1G22040.1 | Thale cress | plastid | 24.62 | 20.63 |
| AT1G16250.2 | Thale cress | cytosol | 18.84 | 19.58 |
| AT3G27150.1 | Thale cress | cytosol | 18.09 | 17.06 |
| AT1G26930.1 | Thale cress | cytosol | 17.09 | 16.15 |
| AT5G40680.1 | Thale cress | mitochondrion | 16.58 | 15.9 |
| AT2G02870.1 | Thale cress | nucleus | 17.59 | 14.99 |
| AT1G14330.1 | Thale cress | nucleus | 16.58 | 14.97 |
| AT1G74510.2 | Thale cress | cytosol | 15.83 | 13.97 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:839888 | ProteinID:AAG50856.1 | ProteinID:AAG52060.1 | ProteinID:AEE31177.1 |
| ArrayExpress:AT1G30090 | EnsemblPlantsGene:AT1G30090 | RefSeq:AT1G30090 | TAIR:AT1G30090 | RefSeq:AT1G30090-TAIR-G | EnsemblPlants:AT1G30090.1 |
| TAIR:AT1G30090.1 | EMBL:AY057619 | EMBL:BT002616 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| RefSeq:NP_564347.1 | PFAM:PF00646 | PFAM:PF01344 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF27 |
| UniProt:Q9C6Z0 | SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI00000ABEE1 |
| SEG:seg | : | : | : | : | : |
Description
F-box/kelch-repeat protein At1g30090 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z0]
Coordinates
chr1:-:10559496..10561545
Molecular Weight (calculated)
45154.5 Da
IEP (calculated)
7.688
GRAVY (calculated)
-0.134
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRVRVSSQR AVVHKLGDSQ MTLSPKFRVA ASIQSTLFDR SSELELSLRG EPLIPGLPDD VALNCLLRVP VQSHVSSKSV CKRWHLLFGT KETFFAKRKE
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.