Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70128 | Canola | cytosol | 89.89 | 94.96 |
| CDY36145 | Canola | cytosol | 76.69 | 78.0 |
| CDY11811 | Canola | plastid | 70.22 | 72.46 |
| CDX90085 | Canola | plastid | 70.22 | 72.46 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 66.57 | 68.5 |
| CDY52247 | Canola | cytosol | 60.96 | 67.81 |
| CDY54825 | Canola | cytosol | 35.39 | 65.28 |
| CDY15708 | Canola | cytosol | 59.55 | 61.81 |
| CDY03923 | Canola | cytosol | 57.02 | 60.06 |
| CDY64382 | Canola | plastid | 56.74 | 59.06 |
| CDY15707 | Canola | cytosol, plastid | 49.16 | 49.58 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 37.92 | 38.24 |
| CDY12647 | Canola | cytosol | 34.83 | 34.25 |
| CDY01812 | Canola | cytosol | 35.67 | 34.05 |
| CDX96091 | Canola | cytosol | 34.83 | 33.24 |
| CDY64883 | Canola | golgi, plastid | 34.55 | 29.93 |
| CDY08233 | Canola | mitochondrion | 24.72 | 20.23 |
| CDY26117 | Canola | cytosol | 24.44 | 20.0 |
| CDX99882 | Canola | mitochondrion, plastid | 22.19 | 19.85 |
| CDY10574 | Canola | cytosol | 24.16 | 19.77 |
| CDY24045 | Canola | mitochondrion | 24.16 | 19.77 |
| CDY02451 | Canola | cytosol | 24.16 | 19.77 |
| CDY35074 | Canola | cytosol | 11.52 | 19.62 |
| CDY26295 | Canola | mitochondrion, plastid | 21.91 | 19.6 |
| CDY33062 | Canola | mitochondrion, plastid | 23.88 | 19.54 |
| CDY51562 | Canola | cytosol | 19.38 | 19.22 |
| CDY01301 | Canola | cytosol | 8.43 | 19.11 |
| CDX99248 | Canola | cytosol | 18.54 | 18.97 |
| CDX82306 | Canola | cytosol | 17.98 | 18.5 |
| CDY58259 | Canola | cytosol | 17.98 | 18.44 |
| CDX76807 | Canola | cytosol | 19.1 | 18.43 |
| CDY31534 | Canola | cytosol | 19.38 | 18.4 |
| CDY18573 | Canola | cytosol | 17.98 | 18.39 |
| CDY58793 | Canola | cytosol | 18.54 | 18.38 |
| CDY22982 | Canola | cytosol | 17.7 | 18.21 |
| CDX80156 | Canola | cytosol | 19.38 | 18.21 |
| CDY34765 | Canola | cytosol | 18.82 | 18.01 |
| CDY34175 | Canola | cytosol | 19.94 | 17.27 |
| CDX81755 | Canola | cytosol | 18.82 | 17.18 |
| CDY28493 | Canola | cytosol | 19.66 | 17.03 |
| CDY60836 | Canola | cytosol | 17.98 | 16.84 |
| CDY46430 | Canola | cytosol | 19.94 | 16.67 |
| CDY33348 | Canola | cytosol | 8.43 | 16.67 |
| CDY62176 | Canola | nucleus | 20.79 | 16.55 |
| CDY16205 | Canola | nucleus | 19.66 | 16.55 |
| CDY52764 | Canola | cytosol | 19.66 | 16.47 |
| CDY17425 | Canola | cytosol | 18.54 | 16.46 |
| CDY70379 | Canola | cytosol | 7.3 | 16.46 |
| CDY33754 | Canola | nucleus | 11.52 | 16.4 |
| CDY09349 | Canola | nucleus | 20.22 | 16.22 |
| CDY13683 | Canola | cytosol | 19.66 | 16.17 |
| CDY01300 | Canola | cytosol | 10.11 | 16.07 |
| CDY65956 | Canola | cytosol | 8.43 | 15.96 |
| CDY03028 | Canola | cytosol | 19.94 | 15.81 |
| CDY49094 | Canola | nucleus | 18.82 | 15.8 |
| CDX96822 | Canola | extracellular, vacuole | 19.1 | 15.74 |
| CDY30645 | Canola | nucleus | 9.83 | 15.7 |
| CDY04697 | Canola | cytosol | 9.83 | 15.7 |
| CDY45190 | Canola | nucleus | 19.94 | 15.67 |
| CDY62015 | Canola | nucleus | 18.26 | 15.66 |
| CDX81631 | Canola | nucleus | 17.7 | 15.4 |
| CDX68177 | Canola | cytosol | 17.98 | 15.35 |
| CDY52395 | Canola | cytosol | 18.26 | 15.01 |
| CDX85842 | Canola | cytosol | 17.98 | 14.99 |
| CDX73096 | Canola | cytosol | 16.85 | 14.96 |
| CDY00415 | Canola | mitochondrion | 8.99 | 14.95 |
| CDX96551 | Canola | cytosol | 16.85 | 14.78 |
| CDX82682 | Canola | cytosol | 12.36 | 14.06 |
| CDX90239 | Canola | cytosol | 15.17 | 13.6 |
| CDY49979 | Canola | cytosol | 15.17 | 13.24 |
| CDY53460 | Canola | cytosol | 6.46 | 13.07 |
| CDY63005 | Canola | cytosol | 15.17 | 12.95 |
| CDY64780 | Canola | cytosol | 15.73 | 12.9 |
| CDY69929 | Canola | cytosol | 14.89 | 12.71 |
| CDY36146 | Canola | cytosol | 14.89 | 12.71 |
| CDY17172 | Canola | cytosol | 5.06 | 12.5 |
| CDY66938 | Canola | cytosol, mitochondrion | 6.18 | 12.5 |
| CDY12345 | Canola | cytosol | 15.45 | 12.09 |
| CDY33755 | Canola | cytosol | 3.93 | 11.38 |
| CDY49977 | Canola | cytosol | 14.61 | 11.06 |
| CDY35075 | Canola | cytosol | 5.06 | 9.78 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078JNC9 | EnsemblPlants:CDY66857 | ProteinID:CDY66857 | ProteinID:CDY66857.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00056716001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 | SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 |
| UniParc:UPI0004EDE8DA | SEG:seg | : | : | : | : |
Description
BnaA08g31090DBnaA08g31090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNC9]
Coordinates
chrLK035525:-:616..2308
Molecular Weight (calculated)
39878.0 Da
IEP (calculated)
5.144
GRAVY (calculated)
-0.304
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSSPSSLI PGLTDDVAEL CLSRIPRCDF RIISQVCRRW RTFLKSKHFS AVRKLTGPVE EFMCVLMKSK SPEDGSRWVE YLYGEVFDAS GNNLGQIPSV
101: PGPLKSQFGV AVLGGGKIVL VGGYAEVEGF PIDGTTRISA SADAYEFDPA TNSWRKLAGM NVPRREFAFA VVGGLLYVIR GFSSDGECLQ SSEVYDPETN
201: QWSLMDDCPD RPDFHRAFAF SFKSKLFVVG NESRFIDIYD PRTETWEELD SGQSLSVYSY TVVRNKVYFF DHNSDYNKPE LGVFDPEENS WSSVSVPRSP
301: GAYWCKVGEW NNKVILVSPL GGRTLIRDLD KENASKWRDT HIKPSGSNPT IVLINF
101: PGPLKSQFGV AVLGGGKIVL VGGYAEVEGF PIDGTTRISA SADAYEFDPA TNSWRKLAGM NVPRREFAFA VVGGLLYVIR GFSSDGECLQ SSEVYDPETN
201: QWSLMDDCPD RPDFHRAFAF SFKSKLFVVG NESRFIDIYD PRTETWEELD SGQSLSVYSY TVVRNKVYFF DHNSDYNKPE LGVFDPEENS WSSVSVPRSP
301: GAYWCKVGEW NNKVILVSPL GGRTLIRDLD KENASKWRDT HIKPSGSNPT IVLINF
001: MVVESSSSPI IPGLTDDVAE LCVSKIPRSS FQITSQVCRR WRSFLRSQHF AAVRKLTGTV EEFLCVLMES ECGRDVYWEV FDASGNKLGQ IPPVPGPLKR
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
Arabidopsis Description
Putative F-box/kelch-repeat protein At1g27420 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZJ3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.