Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66938 | Canola | cytosol, mitochondrion | 44.73 | 79.55 |
| CDY65956 | Canola | cytosol | 45.69 | 76.06 |
| CDY53460 | Canola | cytosol | 42.49 | 75.57 |
| CDY36146 | Canola | cytosol | 81.79 | 61.39 |
| CDY69929 | Canola | cytosol | 81.47 | 61.15 |
| CDY64780 | Canola | cytosol | 83.71 | 60.37 |
| CDY63005 | Canola | cytosol | 80.19 | 60.19 |
| CDY12345 | Canola | cytosol | 80.51 | 55.38 |
| AT5G40680.1 | Thale cress | mitochondrion | 62.3 | 46.99 |
| CDY49979 | Canola | cytosol | 57.51 | 44.12 |
| CDX90239 | Canola | cytosol | 55.91 | 44.08 |
| CDY34175 | Canola | cytosol | 53.04 | 40.39 |
| CDY52395 | Canola | cytosol | 55.59 | 40.18 |
| CDY28493 | Canola | cytosol | 52.08 | 39.66 |
| CDY13683 | Canola | cytosol | 54.31 | 39.26 |
| KRH57678 | Soybean | cytosol | 46.96 | 37.31 |
| KRG94518 | Soybean | mitochondrion | 44.09 | 34.41 |
| KRH06951 | Soybean | cytosol | 44.41 | 34.41 |
| PGSC0003DMT400021985 | Potato | nucleus | 45.37 | 34.05 |
| CDY49977 | Canola | cytosol | 51.12 | 34.04 |
| CDY33755 | Canola | cytosol | 12.14 | 30.89 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 46.96 | 30.82 |
| Solyc07g009410.2.1 | Tomato | cytosol | 41.21 | 28.92 |
| CDY70379 | Canola | cytosol | 14.06 | 27.85 |
| CDY31534 | Canola | cytosol | 31.63 | 26.4 |
| CDX80156 | Canola | cytosol | 31.95 | 26.39 |
| CDY62015 | Canola | nucleus | 34.82 | 26.27 |
| CDX68177 | Canola | cytosol | 34.82 | 26.14 |
| CDY60836 | Canola | cytosol | 31.63 | 26.05 |
| CDX96551 | Canola | cytosol | 33.55 | 25.86 |
| CDY49094 | Canola | nucleus | 34.82 | 25.71 |
| CDX73096 | Canola | cytosol | 32.91 | 25.69 |
| CDX81631 | Canola | nucleus | 33.55 | 25.67 |
| CDX85842 | Canola | cytosol | 34.82 | 25.53 |
| CDY09349 | Canola | nucleus | 36.1 | 25.45 |
| CDY52764 | Canola | cytosol | 34.19 | 25.18 |
| CDY46430 | Canola | cytosol | 34.19 | 25.12 |
| CDY62176 | Canola | nucleus | 35.46 | 24.83 |
| CDY16205 | Canola | nucleus | 33.55 | 24.82 |
| CDY17425 | Canola | cytosol | 31.63 | 24.69 |
| CDY45190 | Canola | nucleus | 34.5 | 23.84 |
| CDY03028 | Canola | cytosol | 34.19 | 23.83 |
| CDY33754 | Canola | nucleus | 14.06 | 17.6 |
| CDY33348 | Canola | cytosol | 9.9 | 17.22 |
| CDY35075 | Canola | cytosol | 9.9 | 16.85 |
| CDY00415 | Canola | mitochondrion | 10.54 | 15.42 |
| CDY24045 | Canola | mitochondrion | 21.41 | 15.4 |
| CDY01300 | Canola | cytosol | 10.86 | 15.18 |
| CDY08233 | Canola | mitochondrion | 20.45 | 14.71 |
| CDY26117 | Canola | cytosol | 20.45 | 14.71 |
| CDY64382 | Canola | plastid | 15.97 | 14.62 |
| CDX99882 | Canola | mitochondrion, plastid | 18.53 | 14.57 |
| CDY54825 | Canola | cytosol | 8.95 | 14.51 |
| CDY03923 | Canola | cytosol | 15.65 | 14.5 |
| CDY33062 | Canola | mitochondrion, plastid | 20.13 | 14.48 |
| CDY52247 | Canola | cytosol | 14.7 | 14.38 |
| CDX81755 | Canola | cytosol | 17.89 | 14.36 |
| CDY26295 | Canola | mitochondrion, plastid | 18.21 | 14.32 |
| CDY58259 | Canola | cytosol | 15.65 | 14.12 |
| CDY12647 | Canola | cytosol | 16.29 | 14.09 |
| CDY18573 | Canola | cytosol | 15.65 | 14.08 |
| CDY02451 | Canola | cytosol | 19.49 | 14.02 |
| CDY10574 | Canola | cytosol | 19.49 | 14.02 |
| CDY15708 | Canola | cytosol | 15.34 | 13.99 |
| CDX82306 | Canola | cytosol | 15.34 | 13.87 |
| CDY22982 | Canola | cytosol | 15.34 | 13.87 |
| CDX96822 | Canola | extracellular, vacuole | 18.85 | 13.66 |
| CDX99248 | Canola | cytosol | 15.02 | 13.51 |
| CDY36145 | Canola | cytosol | 15.02 | 13.43 |
| CDY01812 | Canola | cytosol | 15.97 | 13.4 |
| CDY34765 | Canola | cytosol | 15.34 | 12.9 |
| CDX96091 | Canola | cytosol | 15.34 | 12.87 |
| CDX76807 | Canola | cytosol | 15.02 | 12.74 |
| CDY11811 | Canola | plastid | 13.74 | 12.46 |
| CDX90085 | Canola | plastid | 13.74 | 12.46 |
| CDY70128 | Canola | cytosol | 13.42 | 12.46 |
| CDY66857 | Canola | cytosol | 14.06 | 12.36 |
| CDY51562 | Canola | cytosol | 14.06 | 12.26 |
| CDY64883 | Canola | golgi, plastid | 15.97 | 12.17 |
| CDY58793 | Canola | cytosol | 13.74 | 11.98 |
| CDY15707 | Canola | cytosol, plastid | 12.46 | 11.05 |
| CDY35074 | Canola | cytosol | 7.35 | 11.0 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 9.58 | 8.5 |
| CDY04697 | Canola | cytosol | 5.75 | 8.07 |
| CDY30645 | Canola | nucleus | 5.75 | 8.07 |
| CDY01301 | Canola | cytosol | 3.51 | 7.01 |
| CDY17172 | Canola | cytosol | 3.19 | 6.94 |
Protein Annotations
| EnsemblPlants:CDX82682 | EnsemblPlantsGene:GSBRNA2T00137939001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | PFAM:PF01344 |
| ProteinID:CDX82682 | ProteinID:CDX82682.1 | SEG:seg | SUPFAM:SSF117281 | UniParc:UPI0004EE8328 | MapMan:35.1 |
Description
BnaC07g01840D
Coordinates
chrLK031829:+:1229757..1230698
Molecular Weight (calculated)
35883.9 Da
IEP (calculated)
6.419
GRAVY (calculated)
-0.202
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMVIEDHGL VKPYVIMHAG AESSWEIFDK DFKNFRSLPT IPSSDYCFFH SDKETISVGT QLIVIGREIE GIVVFRYELE NNKWFKGPSM ITPRVMYGSA
101: SHGKTAFFAG GIQMDDNGNP IVVRTVEKYN ADTKMWTMIY GMHKSRKFSS GCFLRGKFYV LSGRNENDKH LTCGERYDEA TNSWELIPGM LKDINFITSS
201: QAPPLIAVVD DNLYLLEISL NELRIYDINT NVWKKLGSVP VSANAVFGWG VTFKSMGDRL LVVGTSHSWS RTTVFYSCQR SPYVEEQHWE ELKYWCDDTE
301: LPRFIHNCCV MFA
101: SHGKTAFFAG GIQMDDNGNP IVVRTVEKYN ADTKMWTMIY GMHKSRKFSS GCFLRGKFYV LSGRNENDKH LTCGERYDEA TNSWELIPGM LKDINFITSS
201: QAPPLIAVVD DNLYLLEISL NELRIYDINT NVWKKLGSVP VSANAVFGWG VTFKSMGDRL LVVGTSHSWS RTTVFYSCQR SPYVEEQHWE ELKYWCDDTE
301: LPRFIHNCCV MFA
001: MFEGRPRDSC LVSTLFTMPS HKETKWSFLV SGKRSFLNND ESDLHFKKMY KLTTDSSEGE DNGSSSDSGT LIPGMNRDDS LSCLIRCSRA DYCSIASVNR
101: SLRSLIRSGE IYRLRRLQGT LEHWVYFSCH LNEWEAFDPR SKRWMHLPSM PQNECFRYAD KESLAVGTDL LVFGWEVSSY VIYRYSLLTN SWSTAKSMNM
201: PRCLFGSASY GEIAVLAGGC DSSGRILDTA ELYNYEDQTW LVLPGMNKRR KMCSGVFMDG KFYVIGGIGV GEENEPKVLT CGEEFDLKTR KWTEIPEMSP
301: PRSNQGNGMS AAAMAPPLVA VVNDQLYAAD HAGMAVRRYD KEKRVWNKVG NLPEQAGSMN GWGLAFRACG DRIIVIGGPK APGEGFIELN SWVPSVTTPE
401: WHLLGKKQSV NFVYNCAVMS C
101: SLRSLIRSGE IYRLRRLQGT LEHWVYFSCH LNEWEAFDPR SKRWMHLPSM PQNECFRYAD KESLAVGTDL LVFGWEVSSY VIYRYSLLTN SWSTAKSMNM
201: PRCLFGSASY GEIAVLAGGC DSSGRILDTA ELYNYEDQTW LVLPGMNKRR KMCSGVFMDG KFYVIGGIGV GEENEPKVLT CGEEFDLKTR KWTEIPEMSP
301: PRSNQGNGMS AAAMAPPLVA VVNDQLYAAD HAGMAVRRYD KEKRVWNKVG NLPEQAGSMN GWGLAFRACG DRIIVIGGPK APGEGFIELN SWVPSVTTPE
401: WHLLGKKQSV NFVYNCAVMS C
Arabidopsis Description
F-box/kelch-repeat protein At1g26930 [Source:UniProtKB/Swiss-Prot;Acc:Q84M94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.