Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG27134 | Sorghum | cytosol | 54.43 | 77.7 |
GSMUA_Achr3P23350_001 | Banana | cytosol, extracellular | 68.49 | 65.26 |
GSMUA_Achr9P30470_001 | Banana | cytosol | 65.1 | 63.94 |
VIT_06s0004g02980.t01 | Wine grape | cytosol | 60.16 | 63.46 |
TraesCS2D01G463000.1 | Wheat | cytosol | 68.49 | 58.84 |
TraesCS2A01G462600.1 | Wheat | cytosol | 68.75 | 58.8 |
HORVU2Hr1G103880.2 | Barley | cytosol | 68.23 | 58.74 |
Zm00001d026321_P001 | Maize | cytosol | 68.49 | 58.71 |
TraesCS2B01G484200.1 | Wheat | cytosol | 68.49 | 58.57 |
Os04t0619300-01 | Rice | cytosol, extracellular | 71.88 | 57.98 |
OQU82347 | Sorghum | mitochondrion | 70.31 | 57.2 |
GSMUA_Achr11P... | Banana | cytosol | 65.1 | 56.82 |
Zm00001d002284_P003 | Maize | mitochondrion | 70.31 | 55.33 |
Zm00001d007538_P001 | Maize | cytosol | 37.24 | 48.15 |
VIT_17s0000g05920.t01 | Wine grape | cytosol | 54.69 | 47.4 |
VIT_01s0026g02080.t01 | Wine grape | nucleus | 54.43 | 38.63 |
Zm00001d019862_P001 | Maize | cytosol | 67.45 | 37.87 |
VIT_14s0068g02150.t01 | Wine grape | cytosol | 39.32 | 31.66 |
VIT_07s0151g00770.t01 | Wine grape | cytosol | 19.53 | 21.74 |
VIT_06s0004g00860.t01 | Wine grape | cytosol | 24.22 | 21.28 |
VIT_11s0016g05050.t01 | Wine grape | cytosol | 23.7 | 21.26 |
VIT_01s0010g03320.t01 | Wine grape | cytosol | 20.57 | 20.52 |
VIT_15s0046g02790.t01 | Wine grape | cytosol | 14.06 | 19.57 |
VIT_15s0046g02710.t01 | Wine grape | cytosol | 18.23 | 19.5 |
VIT_18s0001g04730.t01 | Wine grape | cytosol, plastid | 22.92 | 18.45 |
VIT_12s0055g00910.t01 | Wine grape | cytosol | 22.4 | 17.95 |
VIT_04s0008g02380.t01 | Wine grape | cytosol, peroxisome, plastid | 17.19 | 17.84 |
VIT_10s0003g03730.t01 | Wine grape | cytosol | 9.11 | 15.22 |
Protein Annotations
EntrezGene:100244336 | wikigene:100244336 | Gene3D:2.120.10.80 | MapMan:35.1 | ProteinID:CCB50576 | ProteinID:CCB50576.1 |
UniProt:F6HED0 | EMBL:FN595750 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 | GO:GO:0031625 |
GO:GO:0042787 | GO:GO:0043161 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | EntrezGene:LOC100244336 |
wikigene:LOC100244336 | PFAM:PF01344 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF150 | SMART:SM00612 | SUPFAM:SSF117281 |
UniParc:UPI0002108D79 | ArrayExpress:VIT_16s0039g01470 | EnsemblPlantsGene:VIT_16s0039g01470 | EnsemblPlants:VIT_16s0039g01470.t01 | unigene:Vvi.17908 | RefSeq:XP_002270236 |
RefSeq:XP_002270236.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr16:-:1043972..1047376
Molecular Weight (calculated)
42925.5 Da
IEP (calculated)
7.299
GRAVY (calculated)
-0.228
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MYIPSLDCIG LKKKKPMIRA WAGENHGGQA SDDSFLPGLN DDTALDIFAW SSRSDYSKLA CLNKKFKSLI GSGYLYKLRR RLGVIEHWVY LACILMPWEA
101: FDPERQRWMR LPRMPCDECF TYADKESLAV GTELLVFGRE LSGFAIWMYS LLTRDWSRCP LMNLPRCLFG SSSLGEIAIV AGGSDKNGHV LKSAELYNSE
201: LGTWQTLPDM NLPRKLCSGF FMDGKFYVIG GMSSHTDCLT CGEEYNIETR IWRRIENMYP GSNIGTQFPP AMRSPPLVAV VNNQLYSADQ ATNEVKKYDK
301: SNNSWSVVKR LPVRADSSNG WGLAFKACGD SLLVIGGHRG PEGEVIVLHS WEPEDGNAGG PDWNVLSVRE RAGAFVYNCA VMGC
101: FDPERQRWMR LPRMPCDECF TYADKESLAV GTELLVFGRE LSGFAIWMYS LLTRDWSRCP LMNLPRCLFG SSSLGEIAIV AGGSDKNGHV LKSAELYNSE
201: LGTWQTLPDM NLPRKLCSGF FMDGKFYVIG GMSSHTDCLT CGEEYNIETR IWRRIENMYP GSNIGTQFPP AMRSPPLVAV VNNQLYSADQ ATNEVKKYDK
301: SNNSWSVVKR LPVRADSSNG WGLAFKACGD SLLVIGGHRG PEGEVIVLHS WEPEDGNAGG PDWNVLSVRE RAGAFVYNCA VMGC
001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC
Arabidopsis Description
F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.