Factsheet for Os03t0837300-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0328400-01
Os02t0245000-01
Os02t0272400-00
Os03t0167800-02
Os03t0207400-01
Os03t0836200-03
Os05t0115900-01
Os05t0160200-01
Os06t0215200-01
Os07t0489800-01
Os08t0117400-01
Os10t0409900-01
Os11t0140700-02
Os12t0137200-01
Os12t0580900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23420.1	Os08t0117400-01	AT1G12310.1	21798944
AT2G23420.1	Os02t0245000-01	AT1G14640.1	21798944
AT2G23420.1	Os06t0215200-01	AT1G49590.1	21798944
AT2G23420.1	Os11t0140700-02	AT1G50450.1	21798944
AT2G23420.1	Os12t0137200-01	AT1G50450.1	21798944
AT2G23420.1	Os03t0167800-02	AT1G55270.1	21798944
AT2G23420.1	Os10t0409900-01	AT1G55270.1	21798944
AT2G23420.1	Os07t0489800-01	AT3G16250.1	21798944
AT2G23420.1	Os03t0836200-03	AT3G26420.1	21798944
AT2G23420.1	Os05t0115900-01	AT3G55260.1	21798944
AT2G23420.1	Os01t0328400-01	AT3G62250.1	21798944
AT2G23420.1	Os05t0160200-01	AT3G62250.1	21798944
AT2G23420.1	Os02t0272400-00	AT4G32750.1	21798944
AT2G23420.1	Os03t0207400-01	AT4G33920.1	21798944
AT2G23420.1	Os12t0580900-01	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034777_P005	Maize	cytosol	88.75	89.23
OQU90665	Sorghum	peroxisome	89.11	88.16
TraesCS4A01G354500.1	Wheat	peroxisome	88.39	85.79
TraesCS5B01G517900.3	Wheat	peroxisome	88.21	85.62
TraesCS5D01G517600.1	Wheat	peroxisome	87.86	85.27
GSMUA_Achr11P...	Banana	cytosol	76.61	82.82
KRH04597	Soybean	cytosol	60.54	79.95
VIT_07s0031g00460.t01	Wine grape	cytosol	79.46	79.32
PGSC0003DMT400010254	Potato	cytosol	78.75	79.03
Solyc02g093290.2.1	Tomato	cytosol, extracellular, nucleus	78.57	78.85
Bra017808.1-P	Field mustard	cytosol	73.39	78.14
CDY63965	Canola	cytosol	72.5	78.08
CDY66512	Canola	cytosol	77.32	77.88
Os04t0429800-01	Rice	plasma membrane, plastid	78.21	77.8
CDY46076	Canola	cytosol	77.14	77.7
Bra039198.1-P	Field mustard	cytosol	77.14	77.7
CDY29537	Canola	cytosol	77.86	77.58
AT4G36940.1	Thale cress	cytosol	77.32	77.46
KRH57934	Soybean	cytosol, nucleus	76.96	77.38
AT2G23420.1	Thale cress	cytosol	76.96	77.38
Solyc03g044430.2.1	Tomato	cytosol	76.43	75.62
KRH77015	Soybean	cytosol	72.68	72.94
KRH63322	Soybean	extracellular	9.46	63.86
KRH28456	Soybean	extracellular	19.82	58.73

Protein Annotations

KEGG:00760+6.3.4.21	Gene3D:3.20.140.10	Gene3D:3.20.20.70	EntrezGene:4334711	MapMan:7.9.2.2	ProteinID:AAO41132.1
ProteinID:ABF99773.1	ProteinID:ABF99774.1	EMBL:AK121140	InterPro:Aldolase_TIM	ProteinID:BAF13745.1	ProteinID:BAS87266.1
ProteinID:EEE60258.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004514	GO:GO:0004516	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009435	GO:GO:0009987	GO:GO:0016740
GO:GO:0016757	GO:GO:0019358	InterPro:IPR013785	InterPro:Nic_PRibTrfase-Fam	InterPro:Nic_PRibTrfase_pncB	InterPro:Nicotinate_pribotase_like_C
EnsemblPlantsGene:Os03g0837300	EnsemblPlants:Os03t0837300-02	PFAM:PF04095	PIRSF:PIRSF000484	PANTHER:PTHR11098	PANTHER:PTHR11098:SF17
UniProt:Q851M0	SUPFAM:SSF51690	SUPFAM:SSF54675	TIGRFAMs:TIGR01513	UniParc:UPI000000281A	RefSeq:XP_015632909.1
SEG:seg	:	:	:	:	:

Description

LEAF TIP SENESCENCE 1Similar to Nicotinate phosphoribosyltransferase-like protein. (Os03t0837300-01);Nicotinate phosphoribosyltransferase, Leaf senescence (Os03t0837300-02)

Coordinates

chr3:+:35190821..35197438

Molecular Weight (calculated)

61948.3 Da

IEP (calculated)

5.902

GRAVY (calculated)

-0.039

Length

560 amino acids

Sequence
(BLAST)

001: MAAAAAAAAN GAGGGGGVPR PTNPMVTPLL TDLYQFTMAY AYWKAGKHLD RAVFDLYFRK NPFGGEFTIF GGLEECIRFI ANFKLTDTEI TFLRSAMPTC
101: EDGFFEYLSS IDCSDVEVYA IPEGSVVFPK VPLMIIEGPV AVIQLLETPF LSLVNYASLV TTNAARHRLV AGKSKNLLEF GLRRAQGPDG GISASRYCYM
201: GGFDATSNVA AGWLFGIPIR GTHSHAFVSS FMGLDDIIDR TLASSDGSNK CEDFVSLVQN WLARIKDAGS LRGTFRETNL SELAAFTSYA LAFPNSFLAL
301: VDTYDVMRSG VPNFCAVALA LNDMGYKAAG IRLDSGDLAY LSVETRKFFR AIEEEFGFIG FGKMNITASN DLNEETIDAL NKQGHEVDAF GIGTYLVTCY
401: AQAALGCVFK LVEINKQPRI KLSEDVTKVS IPCKKRCYRL FGKEGYPLVD IMTGEDEPAP KVGERLLCRH PFNESKRAYV VPQHVEELLK CYWPGTTSEP
501: REELPSINEI RSRCMGYLDR MRPDHMRRLN PTPYKVSVSA KLYDFIHFLW LNEAPVGELQ

Best Arabidopsis Sequence Match ( AT4G36940.1 )
(BLAST)

001: MEKKENGLDG KQSGRVINGP TNPMVTPLLN DLYQFTMAYA YWKAGKQSER SVFDLYFRKN PFGGEYTIFA GLEECIKFLA NFNLTDEEID FVRDSLPGCE
101: EAFCDYLRGL DCSDIEVYAI SEGSVVFPKV PLLRIEGPVA VVQLLETPFL NLINYASLVA TNAARHRFVA GKSKLLLEFG ARRAQGPDGA ISASKYCYLG
201: GFDATSNVAA GKLFGIPLRG THSHAFVSSF MSLDEIVDKV LRSSDGKSTC KDFICLVQTC LTKIQNSSSL QGIFSETNQS ELAAFISYAL AFPNSFLALV
301: DTYDVMKSGI PNFCAVALAL NELGYKAVGI RLDSGDLAYL STEVRKFFCA IERDLKVPDF GKMIVTASND LNEETVDALN KQGHEVDAFG IGTNLVTCYA
401: QAALGCVFKL VEINNQPRIK LSEDVTKVSI PCKKRTYRLF GKEGYPLVDI MTGENEPPPK VGERLLCRHP FNESKRAYVV PQRVEELLKC YWRGNADEAR
501: EELEPLKELR NRCIKQLENM RPDHMRRLNP TPYKVSVSAK LYDFIHFLWL NEAPVGELH

Arabidopsis Description

NAPRT1NAPRT1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5W0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.