Factsheet for Os04t0429800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 7
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0328400-01
Os02t0245000-01
Os02t0272400-00
Os03t0167800-02
Os03t0207400-01
Os03t0836200-03
Os05t0115900-01
Os05t0160200-01
Os06t0215200-01
Os07t0489800-01
Os08t0117400-01
Os10t0409900-01
Os11t0140700-02
Os12t0137200-01
Os12t0580900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G23420.1	Os08t0117400-01	AT1G12310.1	21798944
AT2G23420.1	Os02t0245000-01	AT1G14640.1	21798944
AT2G23420.1	Os06t0215200-01	AT1G49590.1	21798944
AT2G23420.1	Os11t0140700-02	AT1G50450.1	21798944
AT2G23420.1	Os12t0137200-01	AT1G50450.1	21798944
AT2G23420.1	Os03t0167800-02	AT1G55270.1	21798944
AT2G23420.1	Os10t0409900-01	AT1G55270.1	21798944
AT2G23420.1	Os07t0489800-01	AT3G16250.1	21798944
AT2G23420.1	Os03t0836200-03	AT3G26420.1	21798944
AT2G23420.1	Os05t0115900-01	AT3G55260.1	21798944
AT2G23420.1	Os01t0328400-01	AT3G62250.1	21798944
AT2G23420.1	Os05t0160200-01	AT3G62250.1	21798944
AT2G23420.1	Os02t0272400-00	AT4G32750.1	21798944
AT2G23420.1	Os03t0207400-01	AT4G33920.1	21798944
AT2G23420.1	Os12t0580900-01	AT4G33920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26318	Sorghum	cytosol, plastid	91.3	90.18
TraesCS2B01G318300.2	Wheat	cytosol, peroxisome, plastid	90.41	89.93
TraesCS2D01G301100.1	Wheat	golgi	90.23	89.75
TraesCS2A01G302400.1	Wheat	cytosol, peroxisome, plastid	90.23	89.75
HORVU2Hr1G075010.5	Barley	peroxisome	89.88	89.08
Zm00001d003674_P001	Maize	extracellular	42.63	88.89
Zm00001d003675_P001	Maize	plastid	33.21	83.86
KRH04597	Soybean	cytosol	61.28	81.37
Zm00001d025412_P001	Maize	plastid	90.41	79.04
VIT_07s0031g00460.t01	Wine grape	cytosol	78.51	78.79
KRH57934	Soybean	cytosol, nucleus	77.44	78.28
Os03t0837300-02	Rice	plasma membrane	77.8	78.21
PGSC0003DMT400010254	Potato	cytosol	77.26	77.96
CDY63965	Canola	cytosol	71.58	77.5
Solyc02g093290.2.1	Tomato	cytosol, extracellular, nucleus	76.55	77.24
AT2G23420.1	Thale cress	cytosol	76.02	76.84
CDY46076	Canola	cytosol	75.49	76.44
Bra039198.1-P	Field mustard	cytosol	75.49	76.44
Solyc03g044430.2.1	Tomato	cytosol	76.2	75.8
CDY66512	Canola	cytosol	74.78	75.72
Bra017808.1-P	Field mustard	cytosol	70.52	75.48
CDY29537	Canola	cytosol	75.13	75.27
AT4G36940.1	Thale cress	cytosol	74.6	75.13
KRH77015	Soybean	cytosol	72.47	73.12
KRH63322	Soybean	extracellular	8.7	59.04
KRH28456	Soybean	extracellular	19.18	57.14

Protein Annotations

KEGG:00760+6.3.4.21	Gene3D:3.20.140.10	Gene3D:3.20.20.70	EntrezGene:4335862	MapMan:7.9.2.2	InterPro:Aldolase_TIM
UniProt:B9FF83	ProteinID:BAS89248.1	ProteinID:EEE61017.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004514
GO:GO:0004516	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009435
GO:GO:0009987	GO:GO:0016740	GO:GO:0019358	InterPro:IPR013785	InterPro:Nic_PRibTrfase-Fam	InterPro:Nic_PRibTrfase_pncB
InterPro:Nicotinate_pribotase_like_C	EnsemblPlantsGene:Os04g0429800	EnsemblPlants:Os04t0429800-01	PIRSF:PIRSF000484	PANTHER:PTHR11098	PANTHER:PTHR11098:SF17
SUPFAM:SSF51690	SUPFAM:SSF54675	TIGRFAMs:TIGR01513	UniParc:UPI0000E57FF1	RefSeq:XP_015635933.1	SEG:seg

Description

NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2Similar to Nicotinate phosphoribosyltransferase-like protein. (Os04t0429800-01)

Coordinates

chr4:+:21310430..21318190

Molecular Weight (calculated)

62441.2 Da

IEP (calculated)

7.254

GRAVY (calculated)

-0.061

Length

563 amino acids

Sequence
(BLAST)

001: MAAVAGSASA GANGSAAAHR VGAPTNPMAT ALLTDQYQFS MAYAYWKAGK HADRAVFDLY FRKNPFGGEF TVFAGLEECI KFIANFKFTE DDILFLQSVM
101: PMCEDAFFDY LRKTDCSDVE VYSIPEGSVV FPKVPLMRVE GPVAVVQLLE TPFVNLINYA SLVTTNAARH RHVAGKSKVL LEFGLRRAQG PDGAISASKY
201: CFMGGFDATS NVLAGNLFGI PLRGTHSHAY VSSYMSLDEI PDKSLKSKDG SRVCKDFVSL VKEWLQKIQL ADSLCGVFGE TNQSELAAFA SYALAFPTNF
301: LALVDTYDVM RSGIPNFCAV ALALHDLGYK ASGIRLDSGD LAYLSIEARK VFRTLEKEFN VPAFGKMIIT ASNDLNEETI DALNKQGHEV DSFGIGTYLV
401: TCYSQAALGC VFKLVEINSR PRIKLSEDVA KVSIPCKKRC FRLYGKEGYP LVDIMMRESE PSPKAGERIL CRHPFLESKR AYVVPQHVEE LLQCYWPGTS
501: NKPRVELPSL EEIRGRCMQQ LEKLRPDHIR RLNPTPYKVS VSAKLYEFIH SLWLNEAPVG ELQ

Best Arabidopsis Sequence Match ( AT2G23420.1 )
(BLAST)

001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ

Arabidopsis Description

NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.