Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G301100.1 | Wheat | golgi | 98.94 | 98.94 |
| TraesCS2A01G302400.1 | Wheat | cytosol, peroxisome, plastid | 98.94 | 98.94 |
| HORVU2Hr1G075010.5 | Barley | peroxisome | 98.23 | 97.89 |
| Os04t0429800-01 | Rice | plasma membrane, plastid | 89.93 | 90.41 |
| KXG26318 | Sorghum | cytosol, plastid | 90.81 | 90.18 |
| Zm00001d003674_P001 | Maize | extracellular | 42.93 | 90.0 |
| Zm00001d003675_P001 | Maize | plastid | 32.51 | 82.51 |
| KRH04597 | Soybean | cytosol | 61.13 | 81.6 |
| Zm00001d025412_P001 | Maize | plastid | 88.87 | 78.11 |
| KRH57934 | Soybean | cytosol, nucleus | 76.68 | 77.92 |
| VIT_07s0031g00460.t01 | Wine grape | cytosol | 76.86 | 77.54 |
| PGSC0003DMT400010254 | Potato | cytosol | 76.15 | 77.24 |
| CDY63965 | Canola | cytosol | 70.85 | 77.12 |
| Solyc02g093290.2.1 | Tomato | cytosol, extracellular, nucleus | 75.8 | 76.88 |
| AT2G23420.1 | Thale cress | cytosol | 75.09 | 76.3 |
| CDY46076 | Canola | cytosol | 74.56 | 75.9 |
| Bra039198.1-P | Field mustard | cytosol | 74.56 | 75.9 |
| TraesCS5B01G517900.3 | Wheat | peroxisome | 77.21 | 75.74 |
| CDY66512 | Canola | cytosol | 73.85 | 75.18 |
| Bra017808.1-P | Field mustard | cytosol | 69.79 | 75.1 |
| Solyc03g044430.2.1 | Tomato | cytosol | 74.91 | 74.91 |
| CDY29537 | Canola | cytosol | 74.38 | 74.91 |
| AT4G36940.1 | Thale cress | cytosol | 73.67 | 74.6 |
| KRH77015 | Soybean | cytosol | 71.2 | 72.22 |
| KRH63322 | Soybean | extracellular | 8.66 | 59.04 |
| KRH28456 | Soybean | extracellular | 19.08 | 57.14 |
Protein Annotations
| KEGG:00760+6.3.4.21 | Gene3D:3.20.140.10 | Gene3D:3.20.20.70 | MapMan:7.9.2.2 | InterPro:Aldolase_TIM | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004514 | GO:GO:0004516 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009435 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0019358 | InterPro:IPR013785 |
| InterPro:Nic_PRibTrfase-Fam | InterPro:Nic_PRibTrfase_pncB | InterPro:Nicotinate_pribotase_like_C | PFAM:PF04095 | PIRSF:PIRSF000484 | PANTHER:PTHR11098 |
| PANTHER:PTHR11098:SF17 | SUPFAM:SSF51690 | SUPFAM:SSF54675 | TIGRFAMs:TIGR01513 | EnsemblPlantsGene:TraesCS2B01G318300 | EnsemblPlants:TraesCS2B01G318300.2 |
| TIGR:cd01570 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:454011383..454018956
Molecular Weight (calculated)
62798.6 Da
IEP (calculated)
7.026
GRAVY (calculated)
-0.048
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MEATAPSVGA GANGSLAAAA RAQVGPPTNP MATALLTDQY QFSMAYAYWK AGKHADHAVF DLYFRKNPFG GEFTVFAGLE ECIKFIANFK FTEDEISFLQ
101: SVMPMCEDAF FDYLRGIDCS DVEVYSIPEG SVVFPKVPLM RVEGPVAVVQ LLETPFVNLI NYASLVTTNA ARHRHVAGKS KVLMEFGLRR AQGPDGAISA
201: SKYCFMGGFD ATSNVLAGHL FGIPLRGTHS HAYVSSYMSL DEIPDRTLRN KDGSKVCMDF VSLVKDWLCK IQAADSLRNV FGDTNQSELA AFASYALAFP
301: SSFLALVDTY DVMRSGIPNF CAVALALHDL GYKASGIRLD SGDLAYLSIE TRKVFHAIEK EFNIPGFGKM IITASNDLNE ETIDALNKQG HEVDAFGIGT
401: YLVTCYSQAA LGCVFKLVEI NSRPRIKLSE DVAKVSIPCK KRCFRLYGKE GYPLVDIMIR ESEPSPKAGE RILCRHPFLE SKRAYVVPQH VEELLHCYWP
501: GSSDKPRAEL PSLVKIRSRC MQQLEKLRPD HIRRLNPTPY KVSVSAKLYE FIHYLWLNEA PVGELQ
101: SVMPMCEDAF FDYLRGIDCS DVEVYSIPEG SVVFPKVPLM RVEGPVAVVQ LLETPFVNLI NYASLVTTNA ARHRHVAGKS KVLMEFGLRR AQGPDGAISA
201: SKYCFMGGFD ATSNVLAGHL FGIPLRGTHS HAYVSSYMSL DEIPDRTLRN KDGSKVCMDF VSLVKDWLCK IQAADSLRNV FGDTNQSELA AFASYALAFP
301: SSFLALVDTY DVMRSGIPNF CAVALALHDL GYKASGIRLD SGDLAYLSIE TRKVFHAIEK EFNIPGFGKM IITASNDLNE ETIDALNKQG HEVDAFGIGT
401: YLVTCYSQAA LGCVFKLVEI NSRPRIKLSE DVAKVSIPCK KRCFRLYGKE GYPLVDIMIR ESEPSPKAGE RILCRHPFLE SKRAYVVPQH VEELLHCYWP
501: GSSDKPRAEL PSLVKIRSRC MQQLEKLRPD HIRRLNPTPY KVSVSAKLYE FIHYLWLNEA PVGELQ
001: MEPKENGSEL GQKIIDGPTN PMVTPLLNDL YQFTMAYAYW KAGKHNERSV FDLYFRKNPF GGEYTVFAGL EECVKFLANF KLTDEEIDFV QECLPGSEEA
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
101: FCDYLRGLDC SDVEVYAIPE GSVVFPKVPL MRVEGPVGVV QLLETPFLNL VNFASLVATN AARHRFVAGK SKSLLEFGAR RAQGPDGAIS ASKYCYLGGF
201: DATSNVAAGK LFGIPLRGTH SHAYVSSFMS TDEIVDKVLR SADGKTTCED FVSHVQTWLK KIQYSPSLSG IFSETNQSEL AAFTSYALAF PKTFLALVDT
301: YDVMKSGIPN FCAVALALND FGYKALGIRL DSGDLAYLSR EARNFFCTVE RELKVPGFGK MVVTASNDLN EETIDALNKQ GHEVDAFGIG TYLVTCYSQA
401: ALGCVFKLVE INNQPRIKLS EDVTKVSIPC KKRSYRLYGK EGYPLVDIMT GENEPPPKVG ERLLCRHPFN ESKRAYVVPQ RVEELLKCYW RGSADEAREV
501: LPPLKEIRDR CIKQLENMRP DHMRRLNPTP YKVSVSAKLY DFIHFLWLNE APVGELQ
Arabidopsis Description
NAPRT2Nicotinate phosphoribosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q84WV8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.