Factsheet for TraesCS1B01G058700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G046100.1	Wheat	extracellular, golgi	96.52	97.23
TraesCS1A01G045400.1	Wheat	unclear	95.6	96.31
HORVU1Hr1G008250.12	Barley	vacuole	93.96	91.61
Os05t0115900-01	Rice	vacuole	86.08	86.88
EES18909	Sorghum	vacuole	79.49	79.49
KRH01584	Soybean	cytosol	27.11	72.55
Zm00001d035598_P001	Maize	extracellular	74.36	69.05
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	68.13	67.64
CDY56564	Canola	cytosol	7.69	66.67
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	63.55	64.14
AT3G55260.1	Thale cress	golgi, vacuole	63.19	63.77
CDY02928	Canola	extracellular, golgi	63.19	63.19
KRH36208	Soybean	nucleus	62.45	62.8
Solyc05g054710.2.1	Tomato	extracellular	63.0	62.32
CDX76112	Canola	golgi, vacuole	62.64	62.18
Bra014765.1-P	Field mustard	golgi, vacuole	62.27	61.82
KRH70518	Soybean	nucleus	62.82	61.8
KRG92959	Soybean	nucleus	60.99	60.99
KRH01583	Soybean	golgi, vacuole	37.36	56.67
TraesCS1B01G270100.1	Wheat	golgi, vacuole	48.17	50.0
TraesCS3B01G434500.1	Wheat	golgi, vacuole	46.52	48.75
TraesCS2B01G221500.1	Wheat	golgi, vacuole	30.04	28.13
TraesCS4B01G243000.1	Wheat	plastid	30.59	27.93

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	PFAM:PF00728
PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	SUPFAM:SSF51445
SUPFAM:SSF55545	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G058700	EnsemblPlants:TraesCS1B01G058700.1	TIGR:cd06562
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:41092162..41097448

Molecular Weight (calculated)

60408.0 Da

IEP (calculated)

6.155

GRAVY (calculated)

-0.041

Length

546 amino acids

Sequence
(BLAST)

001: MPPKLLTRLI LALVAVAVAV SGAAAARRHP APANFTASGN PVYIWPLPKN FTSGTQTLAV DPDLALDPKG AGGGAAAVAE AFQRYRHLIF SPWAHAARPA
101: SAGYDVARLT VVVASADETL ELGVDESYTI YIAAAGGANS IVGGATIEAN TIYGAIRGLE TFSQLCVFNY DTKNVEVRYA PWYIQDEPRF AFRGLMLDTS
201: RHYLPVDVIK QVIDSMSFSK LNVLHWHIID EQSFPLEIPS YPNLWKGSYS KSERYTVEDA RYIVSYAKKR GIHVMAEIDV PGHAESWGNG YPKLWPSLSC
301: TEPLDVSSNF TFEVITGILS DMRKIFPFGL FHLGGDEVYT GCWNLTPHVK QWLDERNMTT KDAYKYFVLK AQEIAIDLNW IPVNWEETFN SFGGSLNPRT
401: VVHNWLGPGV CPKVVAKGLR CIMSNQGVWY LDHLDVPWEQ VYTAEPLAGI DDAAQQKLVL GGEVCMWGET ADTSDVQQTI WPRAAAAAER MWSQLEAISA
501: QDLETTVLAR LHYFRCLLNH RGIAAAPVTN FYARRPPIGP GSCFIQ

Best Arabidopsis Sequence Match ( AT3G55260.1 )
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Arabidopsis Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.