Factsheet for AT3G55260.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 6
extracellular 5
vacuole 5
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02928	Canola	extracellular, golgi	88.72	87.91
Bra014765.1-P	Field mustard	golgi, vacuole	87.99	86.55
CDX76112	Canola	golgi, vacuole	87.99	86.55
KRH01584	Soybean	cytosol	26.8	71.08
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	69.87	69.87
KRH70518	Soybean	nucleus	71.53	69.73
KRH36208	Soybean	nucleus	68.39	68.14
Solyc05g054710.2.1	Tomato	extracellular	69.32	67.93
KRH01583	Soybean	golgi, vacuole	44.92	67.5
KRG92959	Soybean	nucleus	67.84	67.22
TraesCS1D01G046100.1	Wheat	extracellular, golgi	63.4	63.28
TraesCS1B01G058700.1	Wheat	golgi, vacuole	63.77	63.19
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	64.14	63.09
TraesCS1A01G045400.1	Wheat	unclear	63.03	62.92
EES18909	Sorghum	vacuole	63.22	62.64
Os05t0115900-01	Rice	vacuole	61.92	61.92
HORVU1Hr1G008250.12	Barley	vacuole	63.4	61.25
Zm00001d035598_P001	Maize	extracellular	58.41	53.74
AT1G65590.1	Thale cress	vacuole	44.18	44.67
AT1G05590.2	Thale cress	extracellular, golgi	27.36	25.52

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	EntrezGene:824692	UniProt:A0A178VFV1	UniProt:A7WM73
ProteinID:AEE79360.1	EMBL:AK227260	EMBL:AM493720	ArrayExpress:AT3G55260	EnsemblPlantsGene:AT3G55260	RefSeq:AT3G55260
TAIR:AT3G55260	RefSeq:AT3G55260-TAIR-G	EnsemblPlants:AT3G55260.1	TAIR:AT3G55260.1	EMBL:AY084801	Unigene:At.21628
EMBL:BT000920	InterPro:Beta_hexosaminidase_sua/sub	ProteinID:CAB75760.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004563	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005829	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0015929	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0102148	InterPro:Glyco_hydro_20_cat
InterPro:Glycoside_hydrolase_SF	Symbol:HEXO1	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	RefSeq:NP_567017.2
ProteinID:OAP04401.1	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00738
PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI0000197018
SEG:seg	:	:	:	:	:

Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]

Coordinates

chr3:+:20489096..20493096

Molecular Weight (calculated)

61233.2 Da

IEP (calculated)

6.200

GRAVY (calculated)

-0.127

Length

541 amino acids

Sequence
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.