Factsheet for HORVU1Hr1G008250.12

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
vacuole 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
TargetP:	secretory
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G046100.1	Wheat	extracellular, golgi	92.86	95.94
TraesCS1A01G045400.1	Wheat	unclear	92.14	95.2
TraesCS1B01G058700.1	Wheat	golgi, vacuole	91.61	93.96
Os05t0115900-01	Rice	vacuole	85.36	88.35
EES18909	Sorghum	vacuole	77.14	79.12
KRH01584	Soybean	cytosol	26.07	71.57
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	67.14	68.36
Zm00001d035598_P001	Maize	extracellular	71.61	68.2
CDY56564	Canola	cytosol	7.5	66.67
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	61.79	63.96
AT3G55260.1	Thale cress	golgi, vacuole	61.25	63.4
CDY02928	Canola	extracellular, golgi	61.25	62.82
KRH36208	Soybean	nucleus	60.71	62.62
CDX76112	Canola	golgi, vacuole	61.07	62.18
Solyc05g054710.2.1	Tomato	extracellular	61.25	62.14
Bra014765.1-P	Field mustard	golgi, vacuole	60.71	61.82
KRH70518	Soybean	nucleus	61.25	61.8
KRG92959	Soybean	nucleus	59.82	61.36
KRH01583	Soybean	golgi, vacuole	36.61	56.94
HORVU3Hr1G090160.4	Barley	endoplasmic reticulum, golgi, vacuole	44.46	47.79
HORVU1Hr1G064700.2	Barley	plastid	47.14	45.91
HORVU7Hr1G087370.1	Barley	cytosol	4.64	37.14
HORVU2Hr1G037480.2	Barley	golgi, vacuole	28.93	27.79
HORVU4Hr1G067360.4	Barley	plastid	30.36	26.52

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:A0A287EKF4	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005829	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0015929	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	EnsemblPlantsGene:HORVU1Hr1G008250	EnsemblPlants:HORVU1Hr1G008250.12
InterPro:Hex-like_dom2	InterPro:IPR029018	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738
PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000B462372	SEG:seg	:	:	:	:

Description

Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A287EKF4]

Coordinates

chrchr1H:-:17907383..17913396

Molecular Weight (calculated)

62155.9 Da

IEP (calculated)

5.917

GRAVY (calculated)

-0.088

Length

560 amino acids

Sequence
(BLAST)

001: QPQFKTPRII PTDFTKMPPE LLACLFLALV AVSASGAAAA RRHPTPANST ATGNPVYIWP LPKNFTSGTR TLAVDPDLAL DPRGPGGGAS AVAEAFGRYR
101: SLIFSPWAHA ARPASAGYDV ATLTVVVASA DETLELGVDE SYTIYIAVAG GANSIVSGAT IEANTIYGAI RGLETFSQLC VFNYDTKNVE VRYAPWYIQD
201: EPRFAFRGLM LDTSRHYLPV DVIKQVIDSM SFSKLNVLHW HIIDEQSFPL EIPSYPNLWK GSYSKSERYT VEDARYIVSY AKKRGIHVMA EIDVPGHAES
301: WGNGYPKLWP SLSCTEPLDV SSNFTFEVIT GILSDMRKIF PFGLFHLGGD EVYTGCWNLT PHVKQWLDER NMTTKEAYKY FVLKAQEIAI DLNWIPVNWE
401: ETFNSFGESL NPRTVVHNWL GPGVCPKVVA KGLRCIMSNQ GVWYLDHLDV PWEQVYTAEP LAGINDTAQQ KLVLGGEVCM WGETADTSDV QQTIWPRAAA
501: AAERMWSQLE AISAQDLETT VLARLHYFRC LLNHRGIAAA PVTNFYARRP PIGPGSCFLQ

Best Arabidopsis Sequence Match ( AT3G55260.1 )
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Arabidopsis Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.