Factsheet for GSMUA_Achr5P28320_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0115900-01	Rice	vacuole	69.09	70.24
EES18909	Sorghum	vacuole	68.36	68.86
TraesCS1D01G046100.1	Wheat	extracellular, golgi	67.82	68.82
TraesCS1A01G045400.1	Wheat	unclear	67.82	68.82
KRH01584	Soybean	cytosol	25.27	68.14
TraesCS1B01G058700.1	Wheat	golgi, vacuole	67.64	68.13
HORVU1Hr1G008250.12	Barley	vacuole	68.36	67.14
CDY56564	Canola	cytosol	7.45	65.08
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	63.64	64.69
AT3G55260.1	Thale cress	golgi, vacuole	63.09	64.14
CDY02928	Canola	extracellular, golgi	62.91	63.37
KRH36208	Soybean	nucleus	62.0	62.8
CDX76112	Canola	golgi, vacuole	62.55	62.55
KRH70518	Soybean	nucleus	62.91	62.34
Bra014765.1-P	Field mustard	golgi, vacuole	62.0	62.0
Solyc05g054710.2.1	Tomato	extracellular	62.0	61.78
KRG92959	Soybean	nucleus	60.55	60.99
GSMUA_Achr11P...	Banana	cytosol	28.36	57.99
KRH01583	Soybean	golgi, vacuole	37.27	56.94
Zm00001d035598_P001	Maize	extracellular	60.55	56.63
GSMUA_Achr11P...	Banana	cytosol	6.55	54.55
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, vacuole	11.45	41.18
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, vacuole	5.09	35.9
GSMUA_Achr11P...	Banana	cytosol	6.18	35.79
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	28.55	29.46

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004563	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005829	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009505	GO:GO:0015929	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0102148
EnsemblPlantsGene:GSMUA_Achr5G28320_001	EnsemblPlants:GSMUA_Achr5P28320_001	EnsemblPlants:GSMUA_Achr5T28320_001	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N
InterPro:Hex-like_dom2	InterPro:IPR029018	UniProt:M0T2F6	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093
PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM
UniParc:UPI000294DA65	SEG:seg	:	:	:	:

Description

Putative Beta-hexosaminidase subunit B2 [Source:GMGC_GENE;Acc:GSMUA_Achr5G28320_001]

Coordinates

chr5:-:28567574..28580425

Molecular Weight (calculated)

62162.6 Da

IEP (calculated)

5.331

GRAVY (calculated)

-0.223

Length

550 amino acids

Sequence
(BLAST)

001: MASKTFDPFA LPCFLLLSLA ASLLLSPSHG RIPHRRPASS SADDQLVYLW PLPKLFRHGY RTLSVDPDLA LDLQIPGGES LALSEAFERY RDLIFTQWER
101: SAQRSYMDYD VNKLTVLVAS NDDTLQFGVD ESYTLSVGGG ESFSVVNGAA IEANTVYGAL RGLETFSQLC TPNTENKTVE IQKAPWYIED EPRFSFRGLL
201: IDTSRHYLPV NVIKQVIDAM SYAKLNVLHW HIVDEQSFPL EVPSYPNLWK GAYSKLERYT VEDAYEVVDF AKKRGIHIMA EVDVPGHGES WGAGYPDLWP
301: SANCTEPLDV SKNFTFEVIS GILTDMRKIF PFGLFHLGGD EVNTDCWNST RHVKQWLQER NMTTKEAYQY FVLRAQKIAT SLGWIPVNWE ETFNTFKENL
401: DLQTVVHNWL GPGVCPQAVA KGFRCIMSNQ GVWYLDHLDV PWENFYNTEP LEGINNITQQ KLVLGGEVCM WGEAVDTSNV QQTIWPRAAA AAERLWSSWE
501: ATSVGNLNTT VLPRLHYFRC LLNHRGIAAA PVTNKHAREA PYGPASCFLQ

Best Arabidopsis Sequence Match ( AT3G55260.1 )
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Arabidopsis Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.