Factsheet for GSMUA_Achr11P11230_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G396400.1	Wheat	endoplasmic reticulum, golgi, vacuole	73.23	37.81
TraesCS3A01G401600.1	Wheat	endoplasmic reticulum, golgi, vacuole	73.23	37.81
TraesCS3B01G434500.1	Wheat	golgi, vacuole	72.49	37.43
Zm00001d038196_P001	Maize	nucleus	73.23	37.24
KXG22005	Sorghum	golgi, vacuole	73.61	37.22
HORVU3Hr1G090160.4	Barley	endoplasmic reticulum, golgi, vacuole	71.75	37.04
Os05t0415700-01	Rice	extracellular	72.49	36.72
KXG33863	Sorghum	golgi, vacuole	71.0	36.66
TraesCS1D01G259600.1	Wheat	golgi, vacuole	71.38	36.57
Os01t0891000-01	Rice	extracellular	71.38	36.5
TraesCS1B01G270100.1	Wheat	golgi, vacuole	71.38	36.5
Zm00001d012176_P001	Maize	extracellular	70.63	36.12
TraesCS1A01G259800.1	Wheat	nucleus, unclear	70.63	36.05
HORVU1Hr1G064700.2	Barley	plastid	71.75	33.57
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	57.99	28.36
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	36.43	18.39
HORVU7Hr1G087370.1	Barley	cytosol	1.49	5.71
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, vacuole	2.23	3.92
GSMUA_Achr11P...	Banana	cytosol	1.12	3.16
GSMUA_Achr11P...	Banana	cytosol	0.37	1.52
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, vacuole	0.0	0.0

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr11G11230_001	EnsemblPlants:GSMUA_Achr11P11230_001	EnsemblPlants:GSMUA_Achr11T11230_001	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N
InterPro:Hex-like_dom2	InterPro:IPR029018	UniProt:M0RRA3	PFAM:PF00728	PFAM:PF14845	PRINTS:PR00738
PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	SUPFAM:SSF51445	SUPFAM:SSF55545	UniParc:UPI000296DFB0	:

Description

Putative Beta-hexosaminidase subunit B2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G11230_001]

Coordinates

chr11:+:8929234..8934059

Molecular Weight (calculated)

30627.7 Da

IEP (calculated)

5.977

GRAVY (calculated)

-0.022

Length

269 amino acids

Sequence
(BLAST)

001: MIDVVEVNHI VDGRTPTSSV LAGLNVVILS PQDQLNFGID ESYKLDVPAA GKHVYARIEA QTVYGALHAL QTFSQLCHFN IYKRIVELQL APWYILDQPR
101: FPYRGLLIDT SRHYLPLPII KGVIDSMAYS KLNVLHWHIV DKQSFPLEIP SYPRLWAGAY SYSERYTKAD ALEIVQYAER RGVNVLAEID VPGHALSWGV
201: GYPDLWPSAE CQEPLDVSKE FTFKVIDGIL SDFTKVFKFR FVHLGGDEVN TSCWTNTPHI IEWYVSLQT

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.