Factsheet for Os01t0891000-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

extracellular: 17951457

msms PMID: 17951457 doi

J Zhu, S Alvarez, EL Marsh, ME Lenoble, IJ Cho, M Sivaguru, S Chen, HT Nguyen, Y Wu, DP Schachtman, RE Sharp

Division of Plant Sciences, University of Missouri, Columbia, Missouri 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G090160.4	Barley	endoplasmic reticulum, golgi, vacuole	83.27	84.07
TraesCS3A01G401600.1	Wheat	endoplasmic reticulum, golgi, vacuole	83.08	83.88
TraesCS3B01G434500.1	Wheat	golgi, vacuole	82.7	83.49
KXG33863	Sorghum	golgi, vacuole	82.32	83.11
TraesCS3D01G396400.1	Wheat	endoplasmic reticulum, golgi, vacuole	82.32	83.11
Zm00001d012176_P001	Maize	extracellular	81.75	81.75
Os05t0415700-01	Rice	extracellular	73.38	72.69
GSMUA_Achr11P...	Banana	cytosol	36.5	71.38
CDY39278	Canola	cytosol	55.32	68.79
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	27.38	68.25
Solyc11g008810.1.1	Tomato	extracellular, nucleus	62.36	66.0
PGSC0003DMT400041850	Potato	extracellular	63.88	63.28
AT1G65590.1	Thale cress	vacuole	63.31	62.24
Bra004121.1-P	Field mustard	vacuole	62.36	61.42
CDY07456	Canola	vacuole	62.36	61.42
VIT_00s0220g00180.t01	Wine grape	vacuole	28.52	56.18
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	10.84	47.9
Os05t0115900-01	Rice	vacuole	48.29	46.95
Os07t0575500-00	Rice	golgi, vacuole	34.41	29.62
Os03t0219400-01	Rice	golgi, vacuole	32.32	28.1

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	EntrezGene:4324914	ProteinID:BAD87534.1	ProteinID:BAF06966.1
ProteinID:BAS75659.1	InterPro:Beta_hexosaminidase_sua/sub	ProteinID:EEE55788.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018
EnsemblPlantsGene:Os01g0891000	EnsemblPlants:Os01t0891000-01	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738
PANTHER:PTHR22600	PANTHER:PTHR22600:SF18	UniProt:Q5JLX3	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM
UniParc:UPI00004C29E0	RefSeq:XP_015621104.1	SEG:seg	:	:	:

Description

OsSTA39Glycoside hydrolase, family 20 protein. (Os01t0891000-01)

Coordinates

chr1:-:38740059..38745917

Molecular Weight (calculated)

59027.2 Da

IEP (calculated)

5.203

GRAVY (calculated)

-0.121

Length

526 amino acids

Sequence
(BLAST)

001: MAQALSLGLL LAFLAIQSCI AIELTDHIDL WPMPTSVSHG TQRLYVSKDI TMSMEGSTYP DGKGILKDAF QRVVDLMKLN HVVDGANPSS FVLTGVNVVV
101: HSPEDELKFG VDESYNLSVP TAGYPLRVQI EAQTVFGALH ALQTFSQLCY FDFTSKLIEL ISAPWRISDT PRFPYRGLLI DTSRHYLPVT VIKKVIDTMA
201: YSKLNVLHWH IVDAQSFPIE IPSYPKLWNG SYSFSERYTT SDAVDIVRYA ENRGVNVMAE IDVPGHALSW GVGYPSLWPS DSCKEPLDVS NNFTFGVIDG
301: ILSDFSKVFK FKFVHLGGDE VNTSCWTATP HIKKWLDDNQ MNVSDAYRYF VLRSQKLAIS HGYDVINWEE TFNNFGDKLD RRTVVHNWLG EDVAPKVVAA
401: GLRCIVSNQD KWYLDHLDAT WEGFYTNEPL KGIDDPEQQS LVIGGEVCMW GEQIDASDIE QTIWPRAAAA AERLWTPIEK IAEDPRLVTS RLARFRCLLN
501: QRGVAAAPVA GYGRTAPYEP GPCVRQ

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.