CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004121.1-P	Field mustard	vacuole	99.81	99.81
CDY39278	Canola	cytosol	78.46	99.05
AT1G65590.1	Thale cress	vacuole	87.27	87.1
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, vacuole	10.49	71.79
Solyc11g008810.1.1	Tomato	extracellular, nucleus	66.48	71.43
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, vacuole	20.04	69.93
GSMUA_Achr11P...	Banana	cytosol	8.61	69.7
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	27.34	69.19
PGSC0003DMT400041850	Potato	extracellular	67.79	68.17
KXG22005	Sorghum	golgi, vacuole	65.36	65.6
Zm00001d038196_P001	Maize	nucleus	64.23	64.84
TraesCS1D01G259600.1	Wheat	golgi, vacuole	62.92	64.0
TraesCS1A01G259800.1	Wheat	nucleus, unclear	63.11	63.95
TraesCS1B01G270100.1	Wheat	golgi, vacuole	62.73	63.69
Os01t0891000-01	Rice	extracellular	61.42	62.36
Os05t0415700-01	Rice	extracellular	61.8	62.15
TraesCS3D01G396400.1	Wheat	endoplasmic reticulum, golgi, vacuole	60.49	62.0
TraesCS3B01G434500.1	Wheat	golgi, vacuole	60.49	62.0
TraesCS3A01G401600.1	Wheat	endoplasmic reticulum, golgi, vacuole	60.3	61.8
HORVU3Hr1G090160.4	Barley	endoplasmic reticulum, golgi, vacuole	59.93	61.42
KXG33863	Sorghum	golgi, vacuole	59.55	61.04
Zm00001d012176_P001	Maize	extracellular	59.74	60.65
HORVU7Hr1G087370.1	Barley	cytosol	7.87	60.0
HORVU1Hr1G064700.2	Barley	plastid	63.67	59.13
CDY56564	Canola	cytosol	6.74	57.14
GSMUA_Achr11P...	Banana	cytosol	8.8	49.47
CDY02928	Canola	extracellular, golgi	43.63	42.67
CDX76112	Canola	golgi, vacuole	43.82	42.55
CDY06174	Canola	golgi, vacuole	21.54	29.64
CDX78174	Canola	golgi, vacuole	22.47	29.06
CDY10018	Canola	golgi, vacuole	30.52	28.01

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	GO:A0A078F247	UniProt:A0A078F247	InterPro:Beta_hexosaminidase_sua/sub
EnsemblPlants:CDY07456	ProteinID:CDY07456	ProteinID:CDY07456.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0102148	EnsemblPlantsGene:GSBRNA2T00124454001	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2
InterPro:IPR029018	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600
PANTHER:PTHR22600:SF36	MetaCyc:PWY-6902	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI0004EDD319
SEG:seg	:	:	:	:	:

Description

BnaA07g25350DBeta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A078F247]

Coordinates

chrLK031978:+:811921..817452

Molecular Weight (calculated)

60174.0 Da

IEP (calculated)

7.477

GRAVY (calculated)

-0.233

Length

534 amino acids

Sequence
(BLAST)

001: MRGIATKISG LAPLFVLFIA GAVSSFEDIE KLRIWPLPAE VSHGGRRMYL SEDFKLVTEG SKYEDPSGIL KEGFDRMLAV VRLSHVVSGH RNSSSSGGSA
101: LLEGLHVIIS SSTDELEYGA DESYKLVVAS REKPYAQLEA KSVYGALHGL QTFSQLCHFN MKKKVIEILM TPWNITDQPR FSYRGLLIDT SRHYLPLPVM
201: KNVIDSMTYT KLNVLHWHIV DTQSFPLEIP SYPKLWNGAY SPTQRYTFED AAEIVNYAGR RGIHVLAEID VPGHALSWGK GYPSLWPSKN CQEPLDVSSD
301: FTFKVIDGIL SDFSKIFKFK FIHLGGDEVN TTCWSTTPRI SKWLKKHRKT EAEAYEYFVL RAQKIASSHG YEIINWEETF NNFGNKLNPK TVVHNWLGTG
401: VVGRVTAAGL RCIMSNQDKW YLDHIDTPWQ MFYANEPFEM IKDEKRQSLV LGGEVCMWGE HIDASDIQQT IWPRAAAAAE RLWTPYTKLA ENPDKVTTRL
501: AHFRCLLNER GVAAAPLVGG GRVAPFEPGS CLAQ

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.