CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78174	Canola	golgi, vacuole	69.59	98.06
Bra032460.1-P	Field mustard	golgi, vacuole	90.21	90.21
CDY06174	Canola	golgi, vacuole	57.73	86.6
AT1G05590.2	Thale cress	extracellular, golgi	82.65	82.93
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	38.32	71.25
VIT_13s0320g00040.t01	Wine grape	vacuole	66.84	67.53
PGSC0003DMT400079931	Potato	extracellular	61.51	62.26
Solyc01g081610.2.1	Tomato	extracellular	61.34	62.09
KRH43642	Soybean	extracellular, golgi	61.86	61.43
KRH43598	Soybean	nucleus	61.34	61.03
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	53.44	58.35
TraesCS2D01G201900.1	Wheat	golgi, vacuole	54.98	54.98
Zm00001d021895_P001	Maize	extracellular	54.47	54.84
TraesCS2B01G221500.1	Wheat	golgi, vacuole	54.81	54.72
TraesCS2A01G185800.1	Wheat	golgi, vacuole	54.47	54.47
EER99593	Sorghum	extracellular, golgi, vacuole	54.3	54.11
TraesCS4D01G242600.1	Wheat	plastid	55.33	53.85
HORVU2Hr1G037480.2	Barley	golgi, vacuole	53.44	53.34
Zm00001d028235_P001	Maize	extracellular, vacuole	54.81	53.26
TraesCS4B01G243000.1	Wheat	plastid	54.64	53.18
OQU92989	Sorghum	extracellular, golgi	55.5	52.95
Os07t0575500-00	Rice	golgi, vacuole	54.98	52.37
TraesCS4A01G065600.1	Wheat	vacuole	53.61	52.09
Os03t0219400-01	Rice	golgi, vacuole	53.61	51.57
HORVU4Hr1G067360.4	Barley	plastid	53.95	48.99
CDY39278	Canola	cytosol	24.91	34.28
CDY56564	Canola	cytosol	3.44	31.75
CDY07456	Canola	vacuole	28.01	30.52
CDY02928	Canola	extracellular, golgi	25.95	27.66
CDX76112	Canola	golgi, vacuole	26.12	27.64

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	GO:A0A078FDB8	UniProt:A0A078FDB8	InterPro:Beta_hexosaminidase_sua/sub
EnsemblPlants:CDY10018	ProteinID:CDY10018	ProteinID:CDY10018.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0102148	EnsemblPlantsGene:GSBRNA2T00031801001	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2
InterPro:IPR029018	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600
PANTHER:PTHR22600:SF27	MetaCyc:PWY-6902	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EE227E	SEG:seg	:	:	:	:

Description

BnaC08g44330DBeta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A078FDB8]

Coordinates

chrLK032000:-:489305..491819

Molecular Weight (calculated)

64915.1 Da

IEP (calculated)

6.675

GRAVY (calculated)

-0.209

Length

582 amino acids

Sequence
(BLAST)

001: MPTFPKFHVL LVFFVWLLSP WLSSAIPINI WPKPRFLSWP QHKGITLSPD FTIISPQHQH LSASVTRYRN LIHSENYSPL ITSTIKLIKR YTLSKLVVTI
101: TDLSLPLHHG VNESYTLSIP SKSSSAHLSA HSVWGAMHGL ETFSQITWGK APELCVPVGI YIQDSPLFGH RGVLLDTSRN YYGVEDITRT IKAMSANKLN
201: VFHWHITDSH SFPLVLPSEP SLAAKGSYGP DMVYTPEDVS MIVQFGLEHG VRVLPEIDTP GHTGSWGEAY PDIVTCANMF WWPAGKSWEE RLASEPGTGQ
301: LNPLNPKTYE VVQNVIQDVA KLFPEPFFHG GGDEVIPGCW KTDPAITSFL SSGGTLSQLL EKYINSTLPY IVSQNRTAVY WEDVLLDAKI KVDSSVLPKG
401: HTILQTWNNG NANTKRIVAA GYRVIVSSSE YYYLDCGHGG FLGNDSQYDQ QGGGGSSDGG SWCAPFKTWQ TIYNYDIMDG LVDEEERKLV LGGEVALWSE
501: QADPTVLDSR LWPRASAFAE SLWSGNRDER GLKRCGEALD RLNRWRYRMV KRGVGAEPIQ PLWCLKNPGM CNAAVHSASE YL

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.