Factsheet for PGSC0003DMT400079931

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus, plastid, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g081610.2.1	Tomato	extracellular	96.7	96.7
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	39.65	72.84
VIT_13s0320g00040.t01	Wine grape	vacuole	66.96	66.84
KRH43642	Soybean	extracellular, golgi	63.83	62.63
AT1G05590.2	Thale cress	extracellular, golgi	62.43	61.9
CDY10018	Canola	golgi, vacuole	62.26	61.51
Bra032460.1-P	Field mustard	golgi, vacuole	61.91	61.17
CDX78174	Canola	golgi, vacuole	43.3	60.29
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	54.61	58.91
KRH43598	Soybean	nucleus	59.3	58.29
TraesCS2D01G201900.1	Wheat	golgi, vacuole	57.22	56.53
CDY06174	Canola	golgi, vacuole	38.09	56.44
TraesCS2A01G185800.1	Wheat	golgi, vacuole	55.83	55.15
HORVU2Hr1G037480.2	Barley	golgi, vacuole	55.65	54.89
TraesCS2B01G221500.1	Wheat	golgi, vacuole	55.3	54.55
Zm00001d021895_P001	Maize	extracellular	54.43	54.15
EER99593	Sorghum	extracellular, golgi, vacuole	54.78	53.94
Os03t0219400-01	Rice	golgi, vacuole	56.17	53.39
TraesCS4D01G242600.1	Wheat	plastid	55.3	53.18
Os07t0575500-00	Rice	golgi, vacuole	56.17	52.86
TraesCS4B01G243000.1	Wheat	plastid	54.78	52.68
Zm00001d028235_P001	Maize	extracellular, vacuole	54.78	52.59
OQU92989	Sorghum	extracellular, golgi	54.78	51.64
TraesCS4A01G065600.1	Wheat	vacuole	53.22	51.09
HORVU4Hr1G067360.4	Barley	plastid	54.78	49.14
PGSC0003DMT400041850	Potato	extracellular	26.61	28.81

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
EntrezGene:102589156	MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0015929	GO:GO:0016020	GO:GO:0016740
GO:GO:0016787	GO:GO:0016798	GO:GO:0035251	GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF
InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	UniProt:M1D2R0	PFAM:PF00728	PFAM:PF14845
EnsemblPlantsGene:PGSC0003DMG400031128	PGSC:PGSC0003DMG400031128	EnsemblPlants:PGSC0003DMT400079931	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600
PANTHER:PTHR22600:SF27	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002963830
RefSeq:XP_006359129.1	SEG:seg	:	:	:	:

Description

Beta-hexosaminidase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400031128]

Coordinates

chr1:+:67135288..67137796

Molecular Weight (calculated)

64290.2 Da

IEP (calculated)

5.933

GRAVY (calculated)

-0.206

Length

575 amino acids

Sequence
(BLAST)

001: MREEKTFSFF LLLFFILISQ TTATNYPINV WPKPTTFQWP NPKSIFLSST FTISHPYHRY LTPAVDRYRH LILSEHHRPI ITPAINITSS IPLQSLIISV
101: SDVTSPLAHG VNESYSLSTP SDGSASAYIT AETVWGAMRG LETFSQLVYG NPTRVAAGVY IHDLPIFTHR GVVLDTSRNF YGVDHLLRLI KAMSMNKLNV
201: FHWHITDSHS FPLVIPSEPK LAGKGAYSNE MMYSPADVQK IVQYGMEHGV RVLPEIDMPA HTGSWAEAYP EIVTCANMFW WPAGSSPALA AEPGTGQLNP
301: LIPKTYEVVK NVIRDTIAMF PDSLFHGGAD EINSDCWNTD PSVQKFVASN GTLSQLLEKF INNTLPEILS LNRTVVYWED VILSGNVKVN PSLLPPQNVI
401: MQTWNNGPNN TKQLVTSGYR VIVSSADYYY LDCGHGSFVG NDSRYDQPPG TDQGNGGSWC GPFKTWETIY NYDITYGLTD EEAQLVIGGE VALWSEQADS
501: TVMDSRIWPR ASAMAETLWS GNRDETGMKR YAEATDRLNE WRYRMVSRGI GAEPIQPLWC LKNPGMCNTV HSFTS

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.