Factsheet for Os03t0219400-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G242600.1	Wheat	plastid	81.65	82.61
TraesCS4B01G243000.1	Wheat	plastid	81.65	82.61
TraesCS4A01G065600.1	Wheat	vacuole	78.84	79.63
Zm00001d028235_P001	Maize	extracellular, vacuole	77.85	78.63
OQU92989	Sorghum	extracellular, golgi	79.17	78.52
HORVU4Hr1G067360.4	Barley	plastid	80.33	75.82
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	56.03	63.6
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	32.56	62.94
VIT_13s0320g00040.t01	Wine grape	vacuole	54.21	56.94
PGSC0003DMT400079931	Potato	extracellular	53.39	56.17
Solyc01g081610.2.1	Tomato	extracellular	52.56	55.3
KRH43642	Soybean	extracellular, golgi	53.39	55.12
AT1G05590.2	Thale cress	extracellular, golgi	52.07	54.31
Bra032460.1-P	Field mustard	golgi, vacuole	52.23	54.3
Os07t0575500-00	Rice	golgi, vacuole	54.38	53.85
CDY10018	Canola	golgi, vacuole	51.57	53.61
KRH43598	Soybean	nucleus	51.24	52.99
CDX78174	Canola	golgi, vacuole	34.21	50.12
CDY06174	Canola	golgi, vacuole	32.07	50.0
Os01t0891000-01	Rice	extracellular	28.1	32.32
Os05t0415700-01	Rice	extracellular	27.93	31.83
Os05t0115900-01	Rice	vacuole	27.77	31.05

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	EntrezGene:4332084	ProteinID:ABF94676.1	EMBL:AK100702
ProteinID:BAF11315.1	ProteinID:BAS83001.1	InterPro:Beta_hexosaminidase_sua/sub	ProteinID:EEE58606.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2
InterPro:IPR029018	EnsemblPlantsGene:Os03g0219400	EnsemblPlants:Os03t0219400-01	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093
PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF27	UniProt:Q10PW1	SUPFAM:SSF51445	SUPFAM:SSF55545
SignalP:SignalP-noTM	UniParc:UPI0000DB48E4	RefSeq:XP_015632008.1	SEG:seg	:	:

Description

Glycoside hydrolase, family 20 protein. (Os03t0219400-01)

Coordinates

chr3:-:6280458..6282712

Molecular Weight (calculated)

66322.7 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.178

Length

605 amino acids

Sequence
(BLAST)

001: MAALPAYLLL LLLILVILRP AAAPGAASQP PTSEPHLPPP LLAQKVQVWP KPTSISWPSA VYAPLSPSFS VRAVLSHPSL RQAVAFYTRL IRAERHAPLV
101: PPANYTLSRV PVRTLTLSVS DPDVPLGPAV DESYTLSVLP DSGSADISAA TPWGAIRGLE TFSQLAWAGG GAASGGQPIV PSGIEISDRP HFTHRGILLD
201: TARNFYPVRD ILHTLRAMAF NKLNVFHWHI TDAQSFPIVL PTVPNLANSG SYSPTMRYTE NDVRHIVSFA ASFGIRVIPE IDMPGHTGSW AGAYPEIVTC
301: ANRFWAPHAE PALAAEPGTG QLNPLNPKTY RVAQDVLRDM VALFPDPYLH GGADEVNTAC WEDDPVVRRF LAEGGTHDHL LELFINATRP FVAQELNRTV
401: VYWEDVLLGP KVTVGPTILP RETTILQTWN DGPENTKRVV AAGYRAIVSS ASYYYLDCGH GGWVGNDSRY DKQEKEREGT PLFNDPGGTG GSWCAPFKTW
501: QRVYDYDILH GLTDDEAQLV LGGEVALWSE QSDETVLDAR LWPRAAAAAE TLWSGNKGSN GKKRYANATD RLNDWRHRMV ERGIRAEPIQ PLWCSLHPGM
601: CNLSQ

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.