CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028235_P001	Maize	extracellular, vacuole	87.38	88.98
TraesCS4B01G243000.1	Wheat	plastid	78.85	80.43
TraesCS4D01G242600.1	Wheat	plastid	78.52	80.1
Os03t0219400-01	Rice	golgi, vacuole	78.52	79.17
TraesCS4A01G065600.1	Wheat	vacuole	75.25	76.63
HORVU4Hr1G067360.4	Barley	plastid	77.05	73.32
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	56.07	64.17
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	31.97	62.3
VIT_13s0320g00040.t01	Wine grape	vacuole	53.11	56.25
CDY10018	Canola	golgi, vacuole	52.95	55.5
KRH43642	Soybean	extracellular, golgi	53.28	55.46
Bra032460.1-P	Field mustard	golgi, vacuole	52.62	55.15
EER99593	Sorghum	extracellular, golgi, vacuole	52.79	55.14
PGSC0003DMT400079931	Potato	extracellular	51.64	54.78
AT1G05590.2	Thale cress	extracellular, golgi	51.48	54.14
Solyc01g081610.2.1	Tomato	extracellular	50.98	54.09
CDX78174	Canola	golgi, vacuole	35.41	52.3
KRH43598	Soybean	nucleus	49.34	51.45
CDY06174	Canola	golgi, vacuole	31.97	50.26
KXG33863	Sorghum	golgi, vacuole	27.05	31.67
KXG22005	Sorghum	golgi, vacuole	27.21	31.2
EES18909	Sorghum	vacuole	26.56	29.67

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:A0A1Z5SAV5	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N
InterPro:Hex-like_dom2	InterPro:IPR029018	EnsemblPlants:OQU92989	ProteinID:OQU92989	ProteinID:OQU92989.1	PFAM:PF00728
PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF27	EnsemblPlantsGene:SORBI_3001G453600
SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI000B424672	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:73010543..73013187

Molecular Weight (calculated)

67157.8 Da

IEP (calculated)

7.477

GRAVY (calculated)

-0.211

Length

610 amino acids

Sequence
(BLAST)

001: MAASPYFLLL LLFLFHPLAA LAPLAPSPSP SPSQPSPPRS QPPPPRVPQQ VQVWPKPVSI SWPLPVYAPL SPSFSIRASP SHPSLRHAIA YYTRLIRTER
101: HAPIMPPVNY TIAGVPIRLL ALSVSDPDTK LGPGVDESYT LSVPPNSSSA DISAATPWGV IRGLETFSQL AWSSSAAAAG GQPIVPSDLE ISDHPLFTHR
201: GVLLDTARNY YPVGDILRTI RAMAANKLNV FHWHITDAQS FPIVLPSVPN LANLGSYSPT MRYTEQDVRR IVRFAESFGI RVIPEIDMPG HTGSWAAAYP
301: EIVTCANKFW APKAKPALAA EPCTGQLNPL NPKTYRVAQD VLRDLAALFP DPYLHAGADE VNTACWEDDP VVRGFLADGG SHDRLLELFV NATRPFLVHE
401: LNRTSVYWED VLLGPKVSVG QTVLPRDTTV LQTWNNGAAN TKRVVSAGYR VIVSSSSYYY LDCGHGGWVG NDSRYDVQEK EHDGMPLFND PGGTGGSWCA
501: PFKTWQRIYD YDILHGLTED EARRVLGGEV ALWSEQSDAA VLDSRLWPRA SAAAETLWSG NKGSNGRKRY ANATVRLNEW RHRMVARGIR AEPIQPLWCP
601: MHPHMCNLSQ

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.