CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038196_P001	Maize	nucleus	92.48	93.01
TraesCS1A01G259800.1	Wheat	nucleus, unclear	82.52	83.3
TraesCS1D01G259600.1	Wheat	golgi, vacuole	81.77	82.86
TraesCS1B01G270100.1	Wheat	golgi, vacuole	81.39	82.32
Os05t0415700-01	Rice	extracellular	78.76	78.91
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	30.26	76.3
HORVU1Hr1G064700.2	Barley	plastid	80.83	74.78
KXG33863	Sorghum	golgi, vacuole	73.12	74.66
GSMUA_Achr11P...	Banana	cytosol	37.22	73.61
CDY39278	Canola	cytosol	57.71	72.58
Solyc11g008810.1.1	Tomato	extracellular, nucleus	62.22	66.6
AT1G65590.1	Thale cress	vacuole	66.54	66.17
Bra004121.1-P	Field mustard	vacuole	65.6	65.36
CDY07456	Canola	vacuole	65.6	65.36
PGSC0003DMT400041850	Potato	extracellular	63.91	64.03
HORVU7Hr1G087370.1	Barley	cytosol	8.27	62.86
VIT_00s0220g00180.t01	Wine grape	vacuole	29.51	58.8
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	11.28	50.42
EES18909	Sorghum	vacuole	50.19	48.9
EER99593	Sorghum	extracellular, golgi, vacuole	31.2	28.42
OQU92989	Sorghum	extracellular, golgi	31.2	27.21

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:A0A1B6P8N6	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N
InterPro:Hex-like_dom2	InterPro:IPR029018	EnsemblPlants:KXG22005	ProteinID:KXG22005	ProteinID:KXG22005.1	PFAM:PF00728
PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	MetaCyc:PWY-6902
MetaCyc:PWY-7822	EnsemblPlantsGene:SORBI_3009G138300	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI0001C80516
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:49529792..49535286

Molecular Weight (calculated)

59026.3 Da

IEP (calculated)

6.749

GRAVY (calculated)

-0.103

Length

532 amino acids

Sequence
(BLAST)

001: MASPALRLRL RLLLLLAVAA TATARGAGAG RVDLWPMPAS VARGAQTLLV SKDLKLSTAG SSYADGKGIL KEAFQRMLAV VELDHAINGT YSSHGAPVLA
101: GVRVAVRSPN DELNFGVDES YKLSVPATGN PLYAQIEAQT VYGALHALET FSQLCNFDFN ANLIELQSAP WTILDAPRFP YRGLLIDTSR HYLPVPVIKS
201: VIDSMTFSKL NVLHWHIVDE QSFPLQIPSY PKLWNGAYSY SERYTFDDAI DIVQYAEKRG VNVLAEIDVP GHALSWGVGY PSLWPSATCK EPLDVSNEFT
301: FQVINGILSD FSKIFKFKFV HLGGDEVNTS CWSTTPHIKS WLMQHGMNES DAYRYFVLRA QKIAISHGYD IINWEETFNN FGDKLDRKTV VHNWLGSGVA
401: EKVVAAGLRC IVSNQDKWYL DHLDATWEGF YTNEPLTNIY NPEQQKLVLG GEVCMWGEHI DASDIQQTIW PRAAAAAERL WTPIEKLAKD TRSVTARLAR
501: FRCLLNQRGV AAAPLAGYGR SAPSEPGSCL RQ

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.