Factsheet for Os05t0415700-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

extracellular: 19038476
plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22005	Sorghum	golgi, vacuole	78.91	78.76
Zm00001d038196_P001	Maize	nucleus	77.21	77.5
TraesCS1D01G259600.1	Wheat	golgi, vacuole	74.95	75.81
TraesCS1A01G259800.1	Wheat	nucleus, unclear	75.14	75.71
TraesCS1B01G270100.1	Wheat	golgi, vacuole	74.76	75.48
Os01t0891000-01	Rice	extracellular	72.69	73.38
GSMUA_Achr11P...	Banana	cytosol	36.72	72.49
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	27.87	70.14
HORVU1Hr1G064700.2	Barley	plastid	75.33	69.57
CDY39278	Canola	cytosol	55.18	69.27
Solyc11g008810.1.1	Tomato	extracellular, nucleus	60.64	64.79
PGSC0003DMT400041850	Potato	extracellular	62.34	62.34
AT1G65590.1	Thale cress	vacuole	62.34	61.87
Bra004121.1-P	Field mustard	vacuole	62.15	61.8
CDY07456	Canola	vacuole	62.15	61.8
VIT_00s0220g00180.t01	Wine grape	vacuole	29.38	58.43
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	11.3	50.42
HORVU7Hr1G087370.1	Barley	cytosol	6.4	48.57
Os05t0115900-01	Rice	vacuole	47.65	46.77
Os07t0575500-00	Rice	golgi, vacuole	32.2	27.99
Os03t0219400-01	Rice	golgi, vacuole	31.83	27.93

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	EntrezGene:4338802	ProteinID:AAV32135.1	EMBL:AK102449
ProteinID:BAF17471.1	ProteinID:BAS94036.1	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018
EnsemblPlantsGene:Os05g0415700	EnsemblPlants:Os05t0415700-01	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738
PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	UniProt:Q5WMR0	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM
UniParc:UPI000045090E	RefSeq:XP_015640653.1	RefSeq:XP_015640654.1	SEG:seg	:	:

Description

Glycoside hydrolase, family 20 protein. (Os05t0415700-01)

Coordinates

chr5:+:20315236..20320672

Molecular Weight (calculated)

58967.4 Da

IEP (calculated)

5.998

GRAVY (calculated)

-0.061

Length

531 amino acids

Sequence
(BLAST)

001: MAPAMALRLL VVVAVAAVVS CAVAADEGSV VEVWPMPATA SKGGQTLHVS RELRMTAEGS KYADGEAILK DAFQRMVTLI ELDHVINGSS QGLPLLAGVN
101: VVVHLPGDEL NFGVDESYNL SVPATGSPIY AQIEAQTVFG ALHALETFSQ LCNFDFTSRL IELQSAPWSI TDMPRFPYRG LLIDTSRHYL PVPVIKSVID
201: SMTYSKLNVL HWHIVDEQSF PIEIPSYPKL WNGAYSYSER YTMDDAIDIV QYAERRGVNV LAEIDVPGHA LSWGVGYPSL WPSATCKEPL DVSSESTFQV
301: INGILSDFSK VFKFKFVHLG GDEVNTSCWT STPRVKAWLA QHGMKESDAY RYFVLRAQKI AKSHGYEVIN WEETFNNFGD KLDRRTVVHN WLGGGVAEKV
401: VAAGLRCIVS NQDKWYLDHL EVTWDGFYMN EPLRNIKNPA QQKLVLGGEV CMWAEHIDAS DIQQTIWPRA AAAAERLWTP FEKLSKEWEI AALSARLARF
501: RCLLNHRGIA AGPVTGYGRS APAEPSSCIK Q

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.