Factsheet for Zm00001d038196_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 24677780

msms PMID: 24677780 doi

B Guo, Y Chen, C Li, T Wang, R Wang, B Wang, S Hu, X Du, H Xing, X Song, Y Yao, Q Sun, Z Ni

State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China; National Plant Gene Research Centre (Beijing), Beijing, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22005	Sorghum	golgi, vacuole	93.01	92.48
TraesCS1D01G259600.1	Wheat	golgi, vacuole	81.85	82.48
TraesCS1A01G259800.1	Wheat	nucleus, unclear	81.85	82.16
TraesCS1B01G270100.1	Wheat	golgi, vacuole	81.1	81.56
Os05t0415700-01	Rice	extracellular	77.5	77.21
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	30.25	75.83
HORVU1Hr1G064700.2	Barley	plastid	81.47	74.96
Zm00001d012176_P001	Maize	extracellular	73.53	73.95
GSMUA_Achr11P...	Banana	cytosol	37.24	73.23
CDY39278	Canola	cytosol	57.47	71.87
Solyc11g008810.1.1	Tomato	extracellular, nucleus	63.14	67.2
AT1G65590.1	Thale cress	vacuole	65.97	65.23
PGSC0003DMT400041850	Potato	extracellular	64.84	64.6
Bra004121.1-P	Field mustard	vacuole	64.84	64.23
CDY07456	Canola	vacuole	64.84	64.23
HORVU7Hr1G087370.1	Barley	cytosol	8.32	62.86
VIT_00s0220g00180.t01	Wine grape	vacuole	29.49	58.43
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	11.15	49.58
Zm00001d035598_P001	Maize	extracellular	48.96	44.05
Zm00001d021895_P001	Maize	extracellular	32.7	29.93
Zm00001d028235_P001	Maize	extracellular, vacuole	31.19	27.55

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
EntrezGene:103630365	MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:A0A1D6M4F8	ProteinID:AQK86017.1
InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat
InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	PFAM:PF00728	PFAM:PF14845
PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	SUPFAM:SSF51445	SUPFAM:SSF55545
SignalP:SignalP-noTM	UniParc:UPI000220C11E	EnsemblPlantsGene:Zm00001d038196	EnsemblPlants:Zm00001d038196_P001	EnsemblPlants:Zm00001d038196_T001	SEG:seg

Description

Beta-hexosaminidase 3

Coordinates

chr6:+:151266841..151271722

Molecular Weight (calculated)

58565.6 Da

IEP (calculated)

6.347

GRAVY (calculated)

-0.088

Length

529 amino acids

Sequence
(BLAST)

001: MAAALRPRLL VLLAVAAAAT GPSCAGAGRV DLWPMPASVA RGAQTLLVSK DLRLSTAGSS YPDGKGILTE AFRRMVAVVE LDHAINGTYS RGAPVLAGVH
101: VAVRSPNDEL NFGVDESYRL SVPATGDPLY AQIEAQTVYG ALHALETFSQ LCSFDFNANL IELHSAPWTI LDAPRFPYRG LLIDTSRHYL PVPVIKGVID
201: SMTFSKLNVL HWHIVDEQSF PLEISSYPKL WNGAYSYSER YTVDDALDIV QYAEKRGVNV LAEIDVPGHA LSWGVGYPSL WPSATCKEPL DVSNEFTFQL
301: INGILSDFSK IFKFKFVHLG GDEVNTSCWS TTPHIKSWLM QHSMNESDAY RYFVLRAQKI AISHGYDIIN WEETFNNFGD KLDRKTVVHN WLGSGVAEKV
401: VAAGLRCIVS NQDKWYLDHL DATWEGFYTN EPLTNIYNPE QQKLVLGGEV CMWGEHIDAS DIQQTIWPRA AAAAERLWTP IEKLAKDTRS VTARLARFRC
501: LLNQRGVAAA PLAGYGRSAP SEPGSCLRQ

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.