Factsheet for Zm00001d012176_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

extracellular: 22192489

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33863	Sorghum	golgi, vacuole	94.3	95.2
HORVU3Hr1G090160.4	Barley	endoplasmic reticulum, golgi, vacuole	82.7	83.49
TraesCS3B01G434500.1	Wheat	golgi, vacuole	82.51	83.3
TraesCS3D01G396400.1	Wheat	endoplasmic reticulum, golgi, vacuole	82.32	83.11
TraesCS3A01G401600.1	Wheat	endoplasmic reticulum, golgi, vacuole	82.32	83.11
Os01t0891000-01	Rice	extracellular	81.75	81.75
Zm00001d038196_P001	Maize	nucleus	73.95	73.53
GSMUA_Achr11P...	Banana	cytosol	36.12	70.63
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	27.19	67.77
CDY39278	Canola	cytosol	54.37	67.61
Solyc11g008810.1.1	Tomato	extracellular, nucleus	60.08	63.58
PGSC0003DMT400041850	Potato	extracellular	61.79	61.21
AT1G65590.1	Thale cress	vacuole	62.17	61.12
CDY07456	Canola	vacuole	60.65	59.74
Bra004121.1-P	Field mustard	vacuole	60.65	59.74
VIT_00s0220g00180.t01	Wine grape	vacuole	28.33	55.81
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	10.46	46.22
Zm00001d035598_P001	Maize	extracellular	46.01	41.16
Zm00001d021895_P001	Maize	extracellular	32.13	29.24
Zm00001d028235_P001	Maize	extracellular, vacuole	31.75	27.88

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:A0A1D6G7A1	ProteinID:AQK99036.1	InterPro:Beta_hexosaminidase_sua/sub
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF
InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093
PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF18	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0008446AFF	EnsemblPlantsGene:Zm00001d012176	EnsemblPlants:Zm00001d012176_P001	EnsemblPlants:Zm00001d012176_T001	SEG:seg

Description

Beta-hexosaminidase 3

Coordinates

chr8:+:169557355..169562468

Molecular Weight (calculated)

58840.0 Da

IEP (calculated)

5.320

GRAVY (calculated)

-0.147

Length

526 amino acids

Sequence
(BLAST)

001: MAPAAALALS LLLAFLAIGP CAAADSIDLW PMPQSVSHGT QKLYVKKDIT MSMVGSTYSD EKSILKDAFQ RMLDLITLNH VIDGIDPGSS VLTCVNVVVR
101: TPEDELSFGA DESYNLTVPT TGDPLYAQIQ AQTVFGALQA LQTFGQLCYF DFTSRLIELN SAPWIITDRP RFPYRGLLID TARHYLPVKT IKGVIDAMAY
201: SKLNVLHWHI VDEQSFPIEI PSYPKLWNGS YSYSERYTMS DAIDIVRYAE KRGVNVLAEI DVPGHARSWG IGYPALWPSE SCREPLDVSK NFTFEVIDGI
301: LSGDFSKIFK FKFVHLGGDE VNTSCWTRTP HIEGWLNNNH MNVSDAYRDF VLRSQKIAIS HGYDVINWEE TFNSFGDKLD PKTVVHNWLG EDVAPKVVAA
401: GHRCIVSNQD KWYLDHLDAS WEGFYMNEPL KGINDTKQQQ LVIGGEVCMW GEEIDASDIQ QTIWPRAAAA AERLWTPIEK LANDTRFVTS RLARFRCLLN
501: QRGVAAAPLA GYGRASPSEP GPCVRQ

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.