CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012176_P001	Maize	extracellular	95.2	94.3
TraesCS3A01G401600.1	Wheat	endoplasmic reticulum, golgi, vacuole	83.88	83.88
TraesCS3D01G396400.1	Wheat	endoplasmic reticulum, golgi, vacuole	83.49	83.49
TraesCS3B01G434500.1	Wheat	golgi, vacuole	83.49	83.49
HORVU3Hr1G090160.4	Barley	endoplasmic reticulum, golgi, vacuole	83.49	83.49
Os01t0891000-01	Rice	extracellular	83.11	82.32
KXG22005	Sorghum	golgi, vacuole	74.66	73.12
GSMUA_Achr11P...	Banana	cytosol	36.66	71.0
CDY39278	Canola	cytosol	54.89	67.61
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	27.26	67.3
Solyc11g008810.1.1	Tomato	extracellular, nucleus	60.08	62.98
PGSC0003DMT400041850	Potato	extracellular	61.42	60.26
CDY07456	Canola	vacuole	61.04	59.55
Bra004121.1-P	Field mustard	vacuole	61.04	59.55
AT1G65590.1	Thale cress	vacuole	61.04	59.44
VIT_00s0220g00180.t01	Wine grape	vacuole	27.83	54.31
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	10.56	46.22
EES18909	Sorghum	vacuole	48.18	45.97
EER99593	Sorghum	extracellular, golgi, vacuole	31.67	28.25
OQU92989	Sorghum	extracellular, golgi	31.67	27.05

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:A0A1B6Q7F9	InterPro:Beta_hexosaminidase_sua/sub	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF
InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	EnsemblPlants:KXG33863	ProteinID:KXG33863	ProteinID:KXG33863.1
ProteinID:KXG33864.1	ProteinID:KXG33865.1	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738
PFscan:PS51257	PANTHER:PTHR22600	PANTHER:PTHR22600:SF18	MetaCyc:PWY-6902	MetaCyc:PWY-7822	EnsemblPlantsGene:SORBI_3003G384200
SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI00081AB5A4	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:69699518..69704586

Molecular Weight (calculated)

58519.5 Da

IEP (calculated)

5.857

GRAVY (calculated)

-0.166

Length

521 amino acids

Sequence
(BLAST)

001: MAPALRLLLA FLAIGSCIAA DNIDLWPMPQ SVSHGTQKLY IKKDITMSMV GSTYSDEKSI LKDAFQRMVD LITLNHVVDG TNPSSSVLTC VNIVVHTPED
101: ELSFGADESY NLTVPTTGDP LYAQIQAQTV FGALQALQTF SQLCYFDFTS RLIGLNSAPW IITDRPRFPY RGLLIDTARH YLPVKIIKGV IDAMAYSKLN
201: VLHWHIVDEQ SFPIEIPSYP KLWNGSYSYS ERYTTSDAID IVRYAEKRGV NVLAEIDVPG HARSWGVGYP SLWPSESCRE PLDVSKNFTF EVINGILSDF
301: SKIFKFKFVH LGGDEVNTSC WTTTPHIEGW LNNNHMNVSD AYRDFVLRSQ KIAISHGYDI INWEETFNSF GDKLDPRTVV HNWLGEDVAP KVVAAGHRCI
401: VSNQDKWYLD HLDASWEGFY MNEPLKGIND TKQHQLVIGG EVCMWGEEID ASDIQQTIWP RAAAAAERLW TPIEKLANDT RFVTSRLARF RCLLNQRGVA
501: AAPLAGYGRA SPSEPGPCVR Q

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.