CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021895_P001	Maize	extracellular	88.7	89.62
HORVU2Hr1G037480.2	Barley	golgi, vacuole	77.74	77.87
TraesCS2D01G201900.1	Wheat	golgi, vacuole	77.05	77.32
TraesCS2A01G185800.1	Wheat	golgi, vacuole	77.05	77.32
TraesCS2B01G221500.1	Wheat	golgi, vacuole	76.88	77.02
Os07t0575500-00	Rice	golgi, vacuole	76.03	72.67
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	33.9	63.26
VIT_13s0320g00040.t01	Wine grape	vacuole	59.59	60.42
KRH43642	Soybean	extracellular, golgi	57.88	57.68
AT1G05590.2	Thale cress	extracellular, golgi	54.45	54.83
PGSC0003DMT400079931	Potato	extracellular	53.94	54.78
Bra032460.1-P	Field mustard	golgi, vacuole	54.28	54.47
CDY10018	Canola	golgi, vacuole	54.11	54.3
Solyc01g081610.2.1	Tomato	extracellular	53.42	54.26
KRH43598	Soybean	nucleus	54.28	54.19
OQU92989	Sorghum	extracellular, golgi	55.14	52.79
CDX78174	Canola	golgi, vacuole	36.82	52.06
CDY06174	Canola	golgi, vacuole	33.05	49.74
KXG33863	Sorghum	golgi, vacuole	28.25	31.67
KXG22005	Sorghum	golgi, vacuole	28.42	31.2
EES18909	Sorghum	vacuole	26.88	28.75

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	EntrezGene:8056382	InterPro:Beta_hexosaminidase_sua/sub	UniProt:C5XCD4
EnsemblPlants:EER99593	ProteinID:EER99593	ProteinID:EER99593.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018
PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF27
MetaCyc:PWY-6902	MetaCyc:PWY-7822	EnsemblPlantsGene:SORBI_3002G350700	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM
UniParc:UPI0001A83BB3	RefSeq:XP_002463072.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:71489063..71491437

Molecular Weight (calculated)

63799.5 Da

IEP (calculated)

5.030

GRAVY (calculated)

-0.095

Length

584 amino acids

Sequence
(BLAST)

001: MATLLLQLLF LLGWPVTLLT CAAAGASFPV NVWPKPTSMS WAEPHSAVPV SPSFHIVASS GNPYLVSAAE RYAKLLFKET YRPIVRPAVN VTAGNALETL
101: TLAVSDLAAP LQHGVDESYT LEILPTGAAT VTAVTAWGAM RGLETFSQLS WRAGGRGRSR SRDLLLVAAG VRVEDRPLYP HRGLMLDTGR TYFPVSDILR
201: TIDAMAANKM NVFHWHITDS QSFPIVLPSE PSLAEKGAYG EDMVYTVEDV KRIVEFAMSR GVRVVPEIDS PGHTASWAGA YPEAVTCAGK FWLPDGDWNN
301: RLAAEPGAGQ LNPLAPKTYE VITNVVNDLT SLFPDGFYHA GADEVTPGCW QADATIQADL ERGGTLSQLL ERYVSAVHPL VVSKNRTAVY WEDVLLDAAV
401: NVSASLIPPA TTILQSWNNG ANNTKLIVQA GYRAIVSSAS FYYLDCGHGD FVGNNSIYDD PNSDYDTDGG SWCGPYKTWQ RVYDYDITYG LTAEEAQLVI
501: GGEVAMWTEQ VDTAVLDGRV WPRASAMAEA LWSGNRDASG RKRYAEATDR LIDWRQRMVG RGIRAEPIQP LWCRTRPGMC NAVQ

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.