CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, vacuole, cytosol

Predictor Summary:

nucleus 2
vacuole 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
mitochondrion 2
unclear 1
plastid 1
cytosol 2
plasma membrane 1
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, vacuole
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory, unclear
BaCelLo:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory, unclear
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43642	Soybean	extracellular, golgi	95.21	50.85
KRH43598	Soybean	nucleus	81.15	43.42
VIT_13s0320g00040.t01	Wine grape	vacuole	77.0	41.84
PGSC0003DMT400079931	Potato	extracellular	72.84	39.65
AT1G05590.2	Thale cress	extracellular, golgi	72.52	39.14
Bra032460.1-P	Field mustard	golgi, vacuole	72.2	38.83
Solyc01g081610.2.1	Tomato	extracellular	71.25	38.78
CDY10018	Canola	golgi, vacuole	71.25	38.32
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	60.7	35.65
TraesCS2B01G221500.1	Wheat	golgi, vacuole	66.13	35.51
TraesCS2D01G201900.1	Wheat	golgi, vacuole	65.81	35.4
HORVU2Hr1G037480.2	Barley	golgi, vacuole	65.18	34.99
TraesCS2A01G185800.1	Wheat	golgi, vacuole	64.54	34.71
Zm00001d021895_P001	Maize	extracellular	63.9	34.6
EER99593	Sorghum	extracellular, golgi, vacuole	63.26	33.9
TraesCS4D01G242600.1	Wheat	plastid	64.54	33.78
TraesCS4A01G065600.1	Wheat	vacuole	63.9	33.39
TraesCS4B01G243000.1	Wheat	plastid	63.58	33.28
Os07t0575500-00	Rice	golgi, vacuole	64.22	32.9
Zm00001d028235_P001	Maize	extracellular, vacuole	62.62	32.72
Os03t0219400-01	Rice	golgi, vacuole	62.94	32.56
OQU92989	Sorghum	extracellular, golgi	62.3	31.97
HORVU4Hr1G067360.4	Barley	plastid	63.58	31.05
CDX78174	Canola	golgi, vacuole	33.23	25.18
KRH01584	Soybean	cytosol	14.7	22.55
CDY06174	Canola	golgi, vacuole	25.56	20.62
KRH36208	Soybean	nucleus	20.77	11.97
KRH70518	Soybean	nucleus	20.45	11.53
KRG92959	Soybean	nucleus	19.81	11.36
KRH01583	Soybean	golgi, vacuole	6.07	5.28

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	EMBL:ACUP02009789	InterPro:Beta_hexosaminidase_sua/sub	EnsemblPlantsGene:GLYMA_15G265700	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	UniProt:K7ME27	EnsemblPlants:KRH13814	ProteinID:KRH13814
ProteinID:KRH13814.1	PFAM:PF00728	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF27	MetaCyc:PWY-6902
MetaCyc:PWY-7822	SUPFAM:SSF51445	UniParc:UPI00023D8020	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:50090344..50091285

Molecular Weight (calculated)

35041.0 Da

IEP (calculated)

5.032

GRAVY (calculated)

-0.399

Length

313 amino acids

Sequence
(BLAST)

001: MAGHTGSWAL AYPEIVTCAN MFWWPAEGDI IAAEPGTGHL NPLNPKTYQV LKNVIRDTTT LFPEPFYHSG ADEIVPGCWK TDPTIQKYLS NGGTLSQVLE
101: KFINNTLPFI VSLNRTVVYW EDVLLSETVH VPSTILPKEH VVLQTWNNGH NNTKRIVSSG YRAIVSSSDF YYLDCGHGGF VGNNSIYDQQ NGGDKDSGGS
201: WCGPFKTWQT IYNYDIAYGL SEEEEKLVLG GEVALWTEQA DSTVLDGRIW PRSSALAESL WSENRDEKGM KRYAEATDRL NEWRSRMVSR GIGAEPIQPL
301: WSVRNPGMCN TVH

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.