Factsheet for TraesCS2D01G201900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G185800.1	Wheat	golgi, vacuole	96.74	96.74
HORVU2Hr1G037480.2	Barley	golgi, vacuole	92.27	92.11
TraesCS2B01G221500.1	Wheat	golgi, vacuole	91.92	91.77
Zm00001d021895_P001	Maize	extracellular	78.01	78.55
EER99593	Sorghum	extracellular, golgi, vacuole	77.32	77.05
Os07t0575500-00	Rice	golgi, vacuole	74.91	71.36
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	35.4	65.81
VIT_13s0320g00040.t01	Wine grape	vacuole	58.76	59.38
KRH43642	Soybean	extracellular, golgi	58.08	57.68
PGSC0003DMT400079931	Potato	extracellular	56.53	57.22
Solyc01g081610.2.1	Tomato	extracellular	56.19	56.87
AT1G05590.2	Thale cress	extracellular, golgi	55.5	55.69
KRH43598	Soybean	nucleus	55.5	55.21
CDY10018	Canola	golgi, vacuole	54.98	54.98
Bra032460.1-P	Field mustard	golgi, vacuole	54.98	54.98
TraesCS4D01G242600.1	Wheat	plastid	56.19	54.68
CDX78174	Canola	golgi, vacuole	36.6	51.57
CDY06174	Canola	golgi, vacuole	31.96	47.94
TraesCS3D01G396400.1	Wheat	endoplasmic reticulum, golgi, vacuole	29.55	33.01
TraesCS1D01G259600.1	Wheat	golgi, vacuole	29.38	32.57
TraesCS1D01G046100.1	Wheat	extracellular, golgi	28.18	30.26

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	PFAM:PF00728
PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF27	SUPFAM:SSF51445
SUPFAM:SSF55545	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2D01G201900	EnsemblPlants:TraesCS2D01G201900.1	TIGR:cd06562	SEG:seg

Description

No Description!

Coordinates

chr2D:+:153805614..153807527

Molecular Weight (calculated)

63816.6 Da

IEP (calculated)

4.920

GRAVY (calculated)

-0.119

Length

582 amino acids

Sequence
(BLAST)

001: MAAKEAFLAV VLLLSLLSSP LPSGAQASVF PVNVWPKPTS MSWAEPLAAI PVSASFRIVG TSGNSPYLVS ATQRYTALLF AERYRPIVRP AVNVTAGGPA
101: LQSLTVSVSD LSAPLQDGVD ESYELEILPT GVATITAATV WGAMHGLESF SQLAWRGRQG ELLVAAGVRV EDKPLYQHRG LMLDTGRTYF PVVDILRTID
201: TMAANKMNVF HWHITDSQSF PIELPSEPML AEMGAYGEDM RYTVKDVQRI VEFAMSRGVR VVPEIDAPGH TASWAGAYPE AVSCAGKFWL PDASDWGSRL
301: AAEPGSGQLN PLEPKTYEVV ANIINDITSM FPEGLYHAGA DEVTPGCWET DPSIQADMEK GGTLSQLLER YVRAVHPHVV SKNRTVVFWE DVLLDVEVNV
401: SSSVIPPATT ILQTWNNGAN NTKLIVQAGY RAIVSSASFY YLDCGHGDFV GNNSVYDDQR SDYKTDGGSW CGPFKTWQRV YDYDIAYGLT AEEAKLVIGG
501: EVALWTEQAD STVLDARIWP RASAMAEALW SGNRDASGRK RYAEATDRLN DWRHRMVGRG IRAEPIQPLW CRTRPGMCDL VR

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.