CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	43.42	81.15
KRH43642	Soybean	extracellular, golgi	75.73	75.6
VIT_13s0320g00040.t01	Wine grape	vacuole	64.44	65.45
Bra032460.1-P	Field mustard	golgi, vacuole	61.54	61.86
AT1G05590.2	Thale cress	extracellular, golgi	60.85	61.38
CDY10018	Canola	golgi, vacuole	61.03	61.34
PGSC0003DMT400079931	Potato	extracellular	58.29	59.3
Solyc01g081610.2.1	Tomato	extracellular	57.44	58.43
CDX78174	Canola	golgi, vacuole	40.85	57.87
TraesCS2B01G221500.1	Wheat	golgi, vacuole	55.56	55.75
HORVU2Hr1G037480.2	Barley	golgi, vacuole	55.38	55.57
Zm00001d021895_P001	Maize	extracellular	54.87	55.54
TraesCS2D01G201900.1	Wheat	golgi, vacuole	55.21	55.5
TraesCS2A01G185800.1	Wheat	golgi, vacuole	55.04	55.33
CDY06174	Canola	golgi, vacuole	36.24	54.64
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	49.57	54.41
EER99593	Sorghum	extracellular, golgi, vacuole	54.19	54.28
Os07t0575500-00	Rice	golgi, vacuole	54.36	52.05
TraesCS4D01G242600.1	Wheat	plastid	52.48	51.34
Os03t0219400-01	Rice	golgi, vacuole	52.99	51.24
TraesCS4B01G243000.1	Wheat	plastid	51.97	50.84
Zm00001d028235_P001	Maize	extracellular, vacuole	50.6	49.42
OQU92989	Sorghum	extracellular, golgi	51.45	49.34
TraesCS4A01G065600.1	Wheat	vacuole	50.43	49.25
HORVU4Hr1G067360.4	Barley	plastid	52.48	47.89
KRH01583	Soybean	golgi, vacuole	17.09	27.78
KRH70518	Soybean	nucleus	24.27	25.59
KRH36208	Soybean	nucleus	22.56	24.31
KRG92959	Soybean	nucleus	21.71	23.26
KRH01584	Soybean	cytosol	8.03	23.04

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
EntrezGene:100785536	MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	EMBL:ACUP02004870	InterPro:Beta_hexosaminidase_sua/sub
EnsemblPlantsGene:GLYMA_08G159500	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat
InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	UniProt:I1KTS3	InterPro:IPR029018	EnsemblPlants:KRH43598
ProteinID:KRH43598	ProteinID:KRH43598.1	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738
PANTHER:PTHR22600	PANTHER:PTHR22600:SF27	MetaCyc:PWY-6902	MetaCyc:PWY-7822	SUPFAM:SSF51445	SUPFAM:SSF55545
SignalP:SignalP-noTM	UniParc:UPI000233827A	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:12371969..12375904

Molecular Weight (calculated)

65354.0 Da

IEP (calculated)

7.037

GRAVY (calculated)

-0.192

Length

585 amino acids

Sequence
(BLAST)

001: MTQQESTMSL IFLQLLLLLS CLTLNNSIAE STTIINVWPK PRNLTWSPPY QTTLLSSTFT ITTTTNHHNK HLSIAIRRYQ NLIKSEHHHP LVPQAVNISN
101: KYLPPLQTLK VTVVDTAAEL VHAVDESYTL SILPSSCATL TAKTVWGAMR GLETFSQLAW GHPTQVPVGV HVCDSPLYAH RGVMVDTARN YYPVKDLMRT
201: VKALSMNKLN VLHLHLTDAE SFPLVLPSEP ALAEKGAYAP HMVYSPKDVK KLVEFGLDHG VRIIPEIDTP GHTASWALAH PDIVTCANMF WWPAGRDWPH
301: RFASQPGTGH LNPLNPKTYQ VLKNVIHDIT TLFPEPFFHS GTDEIVPGCW KTDPAIQKYL SNGGTLNQLL EKYINNTLPF IVSLNHTVVF WEDVLLDNIV
401: HVPSAILPKE HVILQTWHNG HNHTKKIVSA GYRTIVSSAE FYYLDCGHGS YVGNNSAYDN QDGDMGNGGS WCAPFKTWQT IYNYDIAYGL SEGEAKLVLG
501: GEVALWSEQS DPTVLDARIW PRASALAESM WSGNRDEKGV KRYAEATDRL NEWRSRMVSR GIGAEPIQPF YCVKNPGMCN TVHPV

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.