Factsheet for TraesCS4A01G065600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G242600.1	Wheat	plastid	90.98	91.14
TraesCS4B01G243000.1	Wheat	plastid	90.32	90.47
HORVU4Hr1G067360.4	Barley	plastid	89.15	83.31
Os03t0219400-01	Rice	golgi, vacuole	79.63	78.84
Zm00001d028235_P001	Maize	extracellular, vacuole	77.8	77.8
OQU92989	Sorghum	extracellular, golgi	76.63	75.25
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	33.39	63.9
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	55.09	61.91
VIT_13s0320g00040.t01	Wine grape	vacuole	52.75	54.86
KRH43642	Soybean	extracellular, golgi	53.26	54.44
AT1G05590.2	Thale cress	extracellular, golgi	52.25	53.97
CDY10018	Canola	golgi, vacuole	52.09	53.61
TraesCS2A01G185800.1	Wheat	golgi, vacuole	52.09	53.61
Bra032460.1-P	Field mustard	golgi, vacuole	51.92	53.44
PGSC0003DMT400079931	Potato	extracellular	51.09	53.22
Solyc01g081610.2.1	Tomato	extracellular	50.25	52.35
KRH43598	Soybean	nucleus	49.25	50.43
CDX78174	Canola	golgi, vacuole	33.72	48.91
CDY06174	Canola	golgi, vacuole	30.88	47.68
TraesCS3A01G401600.1	Wheat	endoplasmic reticulum, golgi, vacuole	27.55	31.67
TraesCS1A01G259800.1	Wheat	nucleus, unclear	26.38	29.98
TraesCS1A01G045400.1	Wheat	unclear	26.71	29.52

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018
PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF27
SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G065600	EnsemblPlants:TraesCS4A01G065600.1	TIGR:cd06562
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:63007991..63010098

Molecular Weight (calculated)

61712.2 Da

IEP (calculated)

6.461

GRAVY (calculated)

-0.119

Length

599 amino acids

Sequence
(BLAST)

001: MAAALPYLVL XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXTSIS WPSVVYAPLT PTFSIRAVPP HPALRHAIAY YTRHIRAERH TPLLPPANYT
101: LARVPVRLLT LSVADAKVPL GPDVDESYTL SVPADSASAD ISAATPWGAI RGLETFSQLA WVGGGEAAGG QSIVPSGIEI SDRPLFTHRG ILLDTARNFY
201: PVRDILHTIR AMAFNKLNVF HWHITDAQSF PIVLPTVPSL AHLGSYSPFM RYTDKDVRRI VNYAAAFGVR VIPEIDMPGH TGSWAGAYPE IVTCANKFWA
301: PTASPALAAE PCTGQLNPLN PKAYRVAQDV LRDLSALFPD PFLHGGVDEV NTACWEDDPV VRRFLSEGGT HDNLLELFVN ATRPFMVHEL NRTVVYWEDV
401: LLGPKVMVGA TALPKETTVL QTWNNGAENT KRIVAAGYRA IVSSAAYYYL DCGHGGWVGN DSRYDKQEEE GDGAPLFNDP GGTGGSWCAP FKTWQRVYDY
501: DILHGLTEEE ANLVLGGEVA LWSEQSDAAV LDGRLWPRAA AAAETLWSGN KGASGRKRYA NATDRLNDWR HRMVARGIRA EPLQPLWCPL HPGMCNLSQ

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.