Factsheet for Zm00001d028235_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92989	Sorghum	extracellular, golgi	88.98	87.38
TraesCS4D01G242600.1	Wheat	plastid	80.3	80.43
TraesCS4B01G243000.1	Wheat	plastid	80.3	80.43
Os03t0219400-01	Rice	golgi, vacuole	78.63	77.85
TraesCS4A01G065600.1	Wheat	vacuole	77.8	77.8
HORVU4Hr1G067360.4	Barley	plastid	79.47	74.26
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	57.93	65.1
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	32.72	62.62
Zm00001d021895_P001	Maize	extracellular	55.09	57.09
VIT_13s0320g00040.t01	Wine grape	vacuole	54.42	56.6
KRH43642	Soybean	extracellular, golgi	53.76	54.95
Bra032460.1-P	Field mustard	golgi, vacuole	53.26	54.81
CDY10018	Canola	golgi, vacuole	53.26	54.81
PGSC0003DMT400079931	Potato	extracellular	52.59	54.78
AT1G05590.2	Thale cress	extracellular, golgi	52.59	54.31
Solyc01g081610.2.1	Tomato	extracellular	51.92	54.09
CDX78174	Canola	golgi, vacuole	35.73	51.82
KRH43598	Soybean	nucleus	49.42	50.6
CDY06174	Canola	golgi, vacuole	32.22	49.74
Zm00001d012176_P001	Maize	extracellular	27.88	31.75
Zm00001d038196_P001	Maize	nucleus	27.55	31.19
Zm00001d035598_P001	Maize	extracellular	26.54	27.04

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:B4FYZ2	EMBL:BT042330	InterPro:Beta_hexosaminidase_sua/sub
EMBL:EU957513	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat
InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	ProteinID:ONL95142.1	PFAM:PF00728
PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF27	SUPFAM:SSF51445
SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI00017B756E	EnsemblPlantsGene:Zm00001d028235	EnsemblPlants:Zm00001d028235_P001	EnsemblPlants:Zm00001d028235_T001
SEG:seg	:	:	:	:	:

Description

Beta-hexosaminidase 2

Coordinates

chr1:-:27500580..27502910

Molecular Weight (calculated)

66128.5 Da

IEP (calculated)

6.953

GRAVY (calculated)

-0.197

Length

599 amino acids

Sequence
(BLAST)

001: MAVAASPYFL LLFLFHSLAA LASLAPPPSQ PPPPRVPQKV QVWPKPVSIS WPLPAYAPIS PSFNIRASPS HPSLRHAIAY YTRLIRTERY TPIMPPVNYT
101: VSGVPIRLLA LSVSDPDVPL GPGVDESYTL SVPPNSSSAD ISAATPWGII RGLETFSQLA WSSGAADASG QPIVPSEIEI SDHPLFTHRG ILLDTARNYY
201: PVRDILRTIR AMASNKLNVF HWHITDSQSF PIVLPSVPNL ANFGSYSPVM RYTDQDVRRI VRYAGAFGIR VIPEIDMPGH TGSWAGAYPE IVTCANKFWA
301: PTAKPALAAE PCTGQLNPLN PKTYRVAEDV LRDLAALFPD PYLHAGADEV NTACWEDDPV VRGFLADGGS HDRLLELFVN ATRPFLVHEL NRTSVYWEDV
401: LLGPKVSVGQ TVLPHDTTVL QTWNNGAENT KRIVAAGYRA IVSSASYYYL DCGHGGWVGN DSRYDVQEKE HDGMPLFNDP GGTGGSWCAP FKTWQRIYDY
501: DILHGLTEDE ARRVLGGEVA LWSEQSDAAV LDGRLWPRAS AAAETLWSGN KGSNGRKRYA NATVRLNEWR YRMVARGIRA EPIQPLWCPM HPRMCNLSQ

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.