Factsheet for Zm00001d035598_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18909	Sorghum	vacuole	75.0	80.77
TraesCS1D01G046100.1	Wheat	extracellular, golgi	68.88	74.72
TraesCS1A01G045400.1	Wheat	unclear	68.71	74.54
Os05t0115900-01	Rice	vacuole	68.54	74.49
TraesCS1B01G058700.1	Wheat	golgi, vacuole	69.05	74.36
HORVU1Hr1G008250.12	Barley	vacuole	68.2	71.61
CDY56564	Canola	cytosol	6.97	65.08
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	56.63	60.55
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	55.1	59.89
AT3G55260.1	Thale cress	golgi, vacuole	53.74	58.41
CDY02928	Canola	extracellular, golgi	53.91	58.06
KRH36208	Soybean	nucleus	53.57	58.01
Solyc05g054710.2.1	Tomato	extracellular	54.42	57.97
CDX76112	Canola	golgi, vacuole	53.57	57.27
KRH70518	Soybean	nucleus	53.91	57.12
KRH01583	Soybean	golgi, vacuole	34.86	56.94
Bra014765.1-P	Field mustard	golgi, vacuole	53.23	56.91
KRH01584	Soybean	cytosol	19.73	56.86
KRG92959	Soybean	nucleus	52.21	56.23
Zm00001d038196_P001	Maize	nucleus	44.05	48.96
Zm00001d012176_P001	Maize	extracellular	41.16	46.01
Zm00001d021895_P001	Maize	extracellular	27.72	28.2
Zm00001d028235_P001	Maize	extracellular, vacuole	27.04	26.54

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:A0A1D6LHI9	ProteinID:AQK79338.1	InterPro:Beta_hexosaminidase_sua/sub
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005829	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0015929	GO:GO:0016787	GO:GO:0016798
GO:GO:0030312	GO:GO:0102148	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2
InterPro:IPR006311	InterPro:IPR029018	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738
PFscan:PS51318	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM
InterPro:TAT_signal	TMHMM:TMhelix	UniParc:UPI000842C218	EnsemblPlantsGene:Zm00001d035598	EnsemblPlants:Zm00001d035598_P001	EnsemblPlants:Zm00001d035598_T001
SEG:seg	:	:	:	:	:

Description

Beta-hexosaminidase beta chain

Coordinates

chr6:+:35987763..36000363

Molecular Weight (calculated)

64793.9 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.181

Length

588 amino acids

Sequence
(BLAST)

001: MPPNRPAYLL SALLLAAAAA AVGARRHASP AANATFAGEP VYLWPLPKSV SSGSRTLTVD PDLALDPQGL GGRSPAVAEA FQRYRGLVFA PWAHAARAGR
101: ARYDVTRLTV VVASANDTLA LGVDESYAIY VAAAGGVDSI VGGAIIEANT IYGAIRGLET FSQLCVFNYD TKNVEVHNAP WHIQDEPRFA FRGLLLDTSR
201: HYLPVDVIKQ VIDSMSFAKL NVLHWHIIDE QSFPLEVPTY PNLWKGSYSK WERYTVEDAH DIVNYAKKRG INVMAEIDVP GHAESWGNGY PKLWPSPICT
301: EPLDVSSDFT FEVIFGILSD MRKIFPFGLF HLGGDEVYTG CWNTTPHVRQ WMDERKMTTK DAYKYFVLKA QELAIKLNWT PVNWEETFNS FEENLNPLTV
401: VHNWLGPGVC PKVVAKGFRC IMSNQGVWYL DHLDVPWEDV YSGEPLAGIS DREQQKLVLG GEVCMWGETA DTSDVLQTIW PRAAAAAGTT TSHHTLPQPS
501: SLSTRTHPHP VAAAAAGWLL HCRASVEPAG GHIRPGRRDD RAVTATPLQV PAEPPWGRRG SCHELLRSEA AGRPGFVLRS VKQAAKQE

Best Arabidopsis Sequence Match ( AT3G55260.1 )
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Arabidopsis Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.