CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
golgi 6
plasma membrane 5
endoplasmic reticulum 5
vacuole 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014765.1-P	Field mustard	golgi, vacuole	98.91	98.91
CDY02928	Canola	extracellular, golgi	94.36	95.05
AT3G55260.1	Thale cress	golgi, vacuole	86.55	87.99
CDY56564	Canola	cytosol	9.64	84.13
KRH01584	Soybean	cytosol	26.36	71.08
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	68.36	69.5
KRH70518	Soybean	nucleus	70.0	69.37
KRH36208	Soybean	nucleus	67.27	68.14
KRH01583	Soybean	golgi, vacuole	44.55	68.06
KRG92959	Soybean	nucleus	66.55	67.03
Solyc05g054710.2.1	Tomato	extracellular	66.55	66.3
TraesCS1D01G046100.1	Wheat	extracellular, golgi	62.36	63.28
Os05t0115900-01	Rice	vacuole	62.18	63.22
TraesCS1A01G045400.1	Wheat	unclear	62.18	63.1
TraesCS1B01G058700.1	Wheat	golgi, vacuole	62.18	62.64
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	62.55	62.55
EES18909	Sorghum	vacuole	62.0	62.45
HORVU1Hr1G008250.12	Barley	vacuole	62.18	61.07
Zm00001d035598_P001	Maize	extracellular	57.27	53.57
CDY39278	Canola	cytosol	39.09	50.83
CDY07456	Canola	vacuole	42.55	43.82
CDY06174	Canola	golgi, vacuole	21.27	30.15
CDX78174	Canola	golgi, vacuole	22.36	29.78
CDY10018	Canola	golgi, vacuole	27.64	26.12

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	GO:A0A078CH97	InterPro:Beta_hexosaminidase_sua/sub	EnsemblPlants:CDX76112
ProteinID:CDX76112	ProteinID:CDX76112.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00126386001	InterPro:Glyco_hydro_20_cat
InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	PFAM:PF00728	PFAM:PF14845
PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	MetaCyc:PWY-6902	SUPFAM:SSF51445
SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI0004EE1541	SEG:seg	:	:

Description

BnaA04g03760D

Coordinates

chrLK031806:-:924020..927910

Molecular Weight (calculated)

62267.1 Da

IEP (calculated)

6.396

GRAVY (calculated)

-0.172

Length

550 amino acids

Sequence
(BLAST)

001: MALNLPLRHT LLILLSLSIT ITTSLPSPSP VTIHQGSPPY LWPLPAEFTS GEETLSVDPA LSLTVAGNGG GSPIVRAAFD RYMGLIFKHA YNRASSLLTR
101: IRFLSMVEYD ITSLKIIVHS DSEELQLGVD ESYTLMVSKK NELSIVAAAT IEANTVYGAL RGLETFSQLC AFDYSTKSVQ IYKAPWFIQD TPRFQYRGLL
201: IDTSRHFLPV DVIKQIIESM SYAKLNVLHW HIVDEQSFPF ETPTYPNLWK GAYSRWERYT VEDASEIVRF AKMRGINVMA ELDVPGHAES WGTGYPDLWP
301: SPSCREPLDV TKNFTFDVIS GILADMRKIF PFEFFHLGGD EVNTDCWKNT THVKEWLHGR NFTSKDAYKY FVLRAQQIAI SKNWTPVNWE ETFSSFGKDL
401: DPRTVVQNWL VSDICQKAVA KGFRCIFSNQ GYWYLDHLDV PWDEVYNTEP LNGIHDPSQQ KLVIGGEVCM WGETADTSVV LQTIWPRAAA ASERMWSTRE
501: AVSKGNITLT ALPRLHYFRC LLNNRGVPAA PVDNWYARRP PSGPGSCYAQ

Best Arabidopsis Sequence Match ( AT3G55260.1 )
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Arabidopsis Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.