CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56564	Canola	cytosol	12.78	73.02
KRH70518	Soybean	nucleus	81.94	53.15
AT3G55260.1	Thale cress	golgi, vacuole	67.5	44.92
CDX76112	Canola	golgi, vacuole	68.06	44.55
CDY02928	Canola	extracellular, golgi	66.94	44.14
Bra014765.1-P	Field mustard	golgi, vacuole	66.94	43.82
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	65.56	43.62
KRH36208	Soybean	nucleus	65.56	43.46
KRG92959	Soybean	nucleus	65.28	43.04
Solyc05g054710.2.1	Tomato	extracellular	63.33	41.3
TraesCS1D01G046100.1	Wheat	extracellular, golgi	56.39	37.45
TraesCS1B01G058700.1	Wheat	golgi, vacuole	56.67	37.36
EES18909	Sorghum	vacuole	56.67	37.36
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	56.94	37.27
TraesCS1A01G045400.1	Wheat	unclear	55.83	37.08
Os05t0115900-01	Rice	vacuole	55.56	36.97
HORVU1Hr1G008250.12	Barley	vacuole	56.94	36.61
Zm00001d035598_P001	Maize	extracellular	56.94	34.86
KRH43642	Soybean	extracellular, golgi	29.44	18.09
KRH43598	Soybean	nucleus	27.78	17.09
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	5.28	6.07
KRH01584	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	UniProt:A0A0R0FGU6	EMBL:ACUP02011521	InterPro:Beta_hexosaminidase_sua/sub
EnsemblPlantsGene:GLYMA_18G2862002	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N
InterPro:Hex-like_dom2	InterPro:IPR029018	EnsemblPlants:KRH01583	ProteinID:KRH01583	ProteinID:KRH01583.1	PFAM:PF00728
PFAM:PF14845	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	MetaCyc:PWY-6902	MetaCyc:PWY-7822
SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI0006EDE83C	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:+:56637471..56642659

Molecular Weight (calculated)

40215.8 Da

IEP (calculated)

4.874

GRAVY (calculated)

-0.113

Length

360 amino acids

Sequence
(BLAST)

001: MFVFKPTSSL LFLLLSISYS ASSVTSLTVP PRGGAPLDLT TTPQQQTDGD DDSLTYLWPL PAEFTSGGDT LSVDPALTLS VAGNGGGSAI LREAFGRYRG
101: IVFKNTAGVG FSFIRKLRER LVSSVSAFDV DTLKITVHSD NEELQFGVDE SYTLLVPKAK ESSQVTIEAN TVYGALRGLE TFSQLCSFDY TTKTVKIYKA
201: PWSIQDKPRF AYRGLMLDTS RHYLPIDVIK QIIESMSYAK LNVLHWHIID EQSFPLEIPT YPNLWKGSYT KWERYTVEDA YEIVNFAKMR GINVMAEVDV
301: PGHAESWGAG YPDLWPSPYC REPLDVSKNF TFDVISGILA DMRKLFPFEL FHLGGDEVNT

Best Arabidopsis Sequence Match ( AT3G55260.1 )
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Arabidopsis Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.