CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01583	Soybean	golgi, vacuole	73.02	12.78
CDY02928	Canola	extracellular, golgi	84.13	9.71
CDX76112	Canola	golgi, vacuole	84.13	9.64
Solyc05g054710.2.1	Tomato	extracellular	76.19	8.7
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	74.6	8.69
CDY39278	Canola	cytosol	57.14	8.51
KRH70518	Soybean	nucleus	73.02	8.29
Os05t0115900-01	Rice	vacuole	69.84	8.13
KRH36208	Soybean	nucleus	69.84	8.1
KRG92959	Soybean	nucleus	68.25	7.88
TraesCS1D01G046100.1	Wheat	extracellular, golgi	66.67	7.75
TraesCS1B01G058700.1	Wheat	golgi, vacuole	66.67	7.69
EES18909	Sorghum	vacuole	66.67	7.69
TraesCS1A01G045400.1	Wheat	unclear	65.08	7.56
HORVU1Hr1G008250.12	Barley	vacuole	66.67	7.5
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	65.08	7.45
Zm00001d035598_P001	Maize	extracellular	65.08	6.97
CDY07456	Canola	vacuole	57.14	6.74
CDY06174	Canola	golgi, vacuole	31.75	5.15
CDX78174	Canola	golgi, vacuole	31.75	4.84
CDY10018	Canola	golgi, vacuole	31.75	3.44
KRH01584	Soybean	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY56564	EnsemblPlantsGene:GSBRNA2T00019742001	Gene3D:3.20.20.80	GO:A0A078J0G9	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR22600
PANTHER:PTHR22600:SF36	ProteinID:CDY56564	ProteinID:CDY56564.1	SUPFAM:SSF51445	UniParc:UPI0004EDD507	UniProt:A0A078J0G9
MapMan:18.1.1.7.1	:	:	:	:	:

Description

BnaCnng30620DBnaCnng30620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0G9]

Coordinates

chrLK033499:+:12887..13796

Molecular Weight (calculated)

7293.8 Da

IEP (calculated)

4.564

GRAVY (calculated)

-0.057

Length

63 amino acids

Sequence
(BLAST)

1: MAELDFPRHA ESWGTGYPDL WPSPSCREPL DVTKNFTFDV IAGILADMRK IFPFEFITWA VMK

Best Arabidopsis Sequence Match ( AT3G55260.1 )
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Arabidopsis Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.