CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G046100.1	Wheat	extracellular, golgi	79.67	80.26
Os05t0115900-01	Rice	vacuole	79.49	80.22
TraesCS1A01G045400.1	Wheat	unclear	79.49	80.07
TraesCS1B01G058700.1	Wheat	golgi, vacuole	79.49	79.49
HORVU1Hr1G008250.12	Barley	vacuole	79.12	77.14
Zm00001d035598_P001	Maize	extracellular	80.77	75.0
KRH01584	Soybean	cytosol	26.37	70.59
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	68.86	68.36
CDY56564	Canola	cytosol	7.69	66.67
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	63.37	63.96
Solyc05g054710.2.1	Tomato	extracellular	63.92	63.22
AT3G55260.1	Thale cress	golgi, vacuole	62.64	63.22
CDY02928	Canola	extracellular, golgi	63.0	63.0
KRH36208	Soybean	nucleus	62.45	62.8
KRH70518	Soybean	nucleus	63.19	62.16
CDX76112	Canola	golgi, vacuole	62.45	62.0
Bra014765.1-P	Field mustard	golgi, vacuole	62.45	62.0
KRG92959	Soybean	nucleus	60.81	60.81
KRH01583	Soybean	golgi, vacuole	37.36	56.67
KXG22005	Sorghum	golgi, vacuole	48.9	50.19
KXG33863	Sorghum	golgi, vacuole	45.97	48.18
EER99593	Sorghum	extracellular, golgi, vacuole	28.75	26.88
OQU92989	Sorghum	extracellular, golgi	29.67	26.56

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	EntrezGene:8067346	InterPro:Beta_hexosaminidase_sua/sub	UniProt:C5YYX0
EnsemblPlants:EES18909	ProteinID:EES18909	ProteinID:EES18909.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004563	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005829	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0015929	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0102148	InterPro:Glyco_hydro_20_cat
InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	ProteinID:OQU77256.1	PFAM:PF00728
PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36	MetaCyc:PWY-6902
MetaCyc:PWY-7822	EnsemblPlantsGene:SORBI_3009G017500	SUPFAM:SSF51445	SUPFAM:SSF55545	unigene:Sbi.19796	SignalP:SignalP-noTM
UniParc:UPI0001A88A79	RefSeq:XP_002440479.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:1623444..1630686

Molecular Weight (calculated)

60658.0 Da

IEP (calculated)

6.266

GRAVY (calculated)

-0.139

Length

546 amino acids

Sequence
(BLAST)

001: MPLNLHAYLL SALLLLAGAA AAAAARHHAS PAANATSSSE PVYLWPLPKS VSSGSRTLTV DPDLALDPQG PGGRSPAVAE AFQRYRGHVF TPWAHAARPR
101: GARYDVTRLT VVVNSANDTL ALGVDESYAI YVGAAGGVNS IVGGAIIEAN TIYGAIRGLE TFSQLCVFNY DTKNIEVRNA PWHIQDEPRF AFRGLLLDTS
201: RHYLPVDVIK QVIDSMSFAK LNVLHWHIID EESFPLEVPT YPNLWKGSYS KWERYTVEDA RDIVNYAKKR GINVMAEIDV PGHAESWGNG YPKLWPSPNC
301: TEPLDVSSNF TFEVISGILS DMRKIFPFGL FHLGGDEVYT GCWNTTPHVR QWLNEHNMTT KEAYKYFVLK AQQLAIKLNW IPVNWEETFN SFAENLNPLT
401: VVHNWLGPGV CPKVVAKGFK CIMSNQGVWY LDHLDVPWED VYSGEPLDGI SDKDQQKLVL GGEVCMWGET ADTSDVLQTI WPRAAAAAER LWSQLEAITA
501: QDVETTVLSR LHYFRCLLNH RGIAAAPVTN YYARRPPIGP GSCFVQ

Best Arabidopsis Sequence Match ( AT3G55260.1 )
(BLAST)

001: MSTNLLRLIL LFITLSITSS LSTPSPADSP PYLWPLPAEF SFGNETLSVD PTVTLIVAGN GGGSLIIRAA FDRYMGIIFK HASGRGSLLS RIRFLKMVEY
101: DITSLKIVVH SDSEELQLGV DESYTLMVSK KNEQSIVGAA TIEANTVYGA LRGLETFSQL CAFDYITKSV QIYKAPWYIQ DKPRFGYRGL LIDTSRHYLP
201: IDVIKQIIES MSFAKLNVLH WHIVDEQSFP LETPTYPNLW KGAYSRWERY TVEDASEIVR FAKMRGINVM AEVDVPGHAE SWGTGYPDLW PSLSCREPLD
301: VTKNFTFDVI SGILADMRKI FPFELFHLGG DEVNTDCWKN TTHVKEWLQG RNFTTKDAYK YFVLRAQQIA ISKNWTPVNW EETFSSFGKD LDPRTVIQNW
401: LVSDICQKAV AKGFRCIFSN QGYWYLDHLD VPWEEVYNTE PLNGIEDPSL QKLVIGGEVC MWGETADTSV VLQTIWPRAA AAAERMWSTR EAVSKGNITL
501: TALPRLHYFR CLLNNRGVPA APVDNFYARR PPLGPGSCYA Q

Arabidopsis Description

HEXO1Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:A0A178VFV1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.