Factsheet for GSMUA_Achr2P07820_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	35.65	60.7
Zm00001d028235_P001	Maize	extracellular, vacuole	65.1	57.93
TraesCS4D01G242600.1	Wheat	plastid	63.6	56.69
TraesCS4B01G243000.1	Wheat	plastid	63.04	56.19
OQU92989	Sorghum	extracellular, golgi	64.17	56.07
Os03t0219400-01	Rice	golgi, vacuole	63.6	56.03
VIT_13s0320g00040.t01	Wine grape	vacuole	60.41	55.9
TraesCS4A01G065600.1	Wheat	vacuole	61.91	55.09
PGSC0003DMT400079931	Potato	extracellular	58.91	54.61
KRH43642	Soybean	extracellular, golgi	59.85	54.44
Solyc01g081610.2.1	Tomato	extracellular	58.54	54.26
CDX78174	Canola	golgi, vacuole	42.03	54.24
AT1G05590.2	Thale cress	extracellular, golgi	58.72	53.97
Bra032460.1-P	Field mustard	golgi, vacuole	58.54	53.61
CDY10018	Canola	golgi, vacuole	58.35	53.44
HORVU4Hr1G067360.4	Barley	plastid	62.85	52.26
CDY06174	Canola	golgi, vacuole	37.9	52.06
KRH43598	Soybean	nucleus	54.41	49.57
GSMUA_Achr11P...	Banana	cytosol	18.39	36.43
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, vacuole	8.82	30.72
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, vacuole	4.32	29.49
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	29.46	28.55
GSMUA_Achr11P...	Banana	cytosol	3.19	25.76
GSMUA_Achr11P...	Banana	cytosol	3.75	21.05

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0015929	GO:GO:0016020	GO:GO:0016740
GO:GO:0016787	GO:GO:0016798	GO:GO:0035251	GO:GO:0102148	EnsemblPlantsGene:GSMUA_Achr2G07820_001	EnsemblPlants:GSMUA_Achr2P07820_001
EnsemblPlants:GSMUA_Achr2T07820_001	InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018
UniProt:M0S623	PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600
PANTHER:PTHR22600:SF27	SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029544D7
SEG:seg	:	:	:	:	:

Description

Putative Beta-hexosaminidase [Source:GMGC_GENE;Acc:GSMUA_Achr2G07820_001]

Coordinates

chr2:-:12110532..12112407

Molecular Weight (calculated)

58516.9 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.069

Length

533 amino acids

Sequence
(BLAST)

001: MESTPSILFF LVFVVIVNVI SLVSSSDAAP LIEINVWPKP ISVSWSGPAA IAVPLSPSFR RYRPLRPPHL NLSSSAPPLS SLALSVVDPS APLRHGVDES
101: YTLSITANGS SSVAELSAAT PWGAMRGLET LSQLAWGNPP AVAAGIRIED RPLFPHRGLL LDTSRNFYPV RDILRTIRAM SHNKLNVFHW HITDSQSFPL
201: LLPSAPQLAL RGSYGPDMRY TPADVRRVVR YAMNRGIRVI PEIDAPGHTA SWAEAYPEIV TCANKFWSPP DGPALAAEPG TGQLNPLEPE TYEVVRDVLR
301: GVASLFPDPF LHAGADEVNP ACWEQDPAIR RFLAGGGTHD QLLGMFVNAT RPFIVSALNR TVVYWEDVLL GSTVKVVSPG LLPPETTVLQ TWNNGPNNTK
401: RLTAAGYRVI VSSSDFYYLD CGFGGWSWQR VYDYDITHGL SAAEAELVLG GEVALWSEQA DGAVMDGRLW PRAAAMAEAL WSGNRDGDGR KRYAEATDRL
501: HEWRQRMVRR GIAAEPIQPL WCVMHPSMCN MVQ

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.