Factsheet for GSMUA_AchrUn_randomP29240_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole, cytosol

Predictor Summary:

plastid 1
mitochondrion 3
vacuole 1
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	40.52	93.94
GSMUA_Achr11P...	Banana	cytosol	37.25	60.0
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	75.82	54.98
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	29.41	37.82
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, vacuole	14.38	28.21
CDY39278	Canola	cytosol	69.93	25.3
Solyc11g008810.1.1	Tomato	extracellular, nucleus	74.51	22.94
PGSC0003DMT400041850	Potato	extracellular	75.16	21.66
Bra004121.1-P	Field mustard	vacuole	70.59	20.22
CDY07456	Canola	vacuole	69.93	20.04
AT1G65590.1	Thale cress	vacuole	69.93	20.0
GSMUA_Achr5P28320_001	Banana	extracellular, golgi	41.18	11.45
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	30.72	8.82
GSMUA_Achr11P...	Banana	cytosol	3.92	2.23
VIT_00s0220g00180.t01	Wine grape	vacuole	1.96	1.12

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
MapMan:18.1.1.7.1	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSMUA_AchrUn_randomG29240_001	EnsemblPlants:GSMUA_AchrUn_randomP29240_001	EnsemblPlants:GSMUA_AchrUn_randomT29240_001
InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	UniProt:M0UDD1	PFAM:PF00728	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36
SUPFAM:SSF51445	UniParc:UPI0002956BCC	SEG:seg	:	:	:

Description

Putative Beta-hexosaminidase subunit alpha [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG29240_001]

Coordinates

chrchrUn_random:-:141047158..141048280

Molecular Weight (calculated)

17315.5 Da

IEP (calculated)

6.928

GRAVY (calculated)

-0.336

Length

153 amino acids

Sequence
(BLAST)

001: YLPTLCNFFY RLNKHGMNES QGYKYFVLRA QKIALSHGYE VINWEETFNN FGSQLSPKTV VHNWLGGGVA QKVVAAGLRC IVSNQDKWYL DHLDVPWQKF
101: YMNEPLTNIS TPEQQKLVIG GEVCMWGESI DASDIEQTIW PRAAAAAGNT GKN

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.