Factsheet for VIT_00s0220g00180.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g008810.1.1	Tomato	extracellular, nucleus	65.54	35.21
PGSC0003DMT400041850	Potato	extracellular	68.54	34.46
KXG22005	Sorghum	golgi, vacuole	58.8	29.51
Zm00001d038196_P001	Maize	nucleus	58.43	29.49
Os05t0415700-01	Rice	extracellular	58.43	29.38
TraesCS3B01G434500.1	Wheat	golgi, vacuole	56.93	29.17
HORVU3Hr1G090160.4	Barley	endoplasmic reticulum, golgi, vacuole	56.55	28.98
TraesCS3D01G396400.1	Wheat	endoplasmic reticulum, golgi, vacuole	56.55	28.98
TraesCS3A01G401600.1	Wheat	endoplasmic reticulum, golgi, vacuole	56.55	28.98
Os01t0891000-01	Rice	extracellular	56.18	28.52
Zm00001d012176_P001	Maize	extracellular	55.81	28.33
KXG33863	Sorghum	golgi, vacuole	54.31	27.83
TraesCS1A01G259800.1	Wheat	nucleus, unclear	54.68	27.7
TraesCS1D01G259600.1	Wheat	golgi, vacuole	54.31	27.62
TraesCS1B01G270100.1	Wheat	golgi, vacuole	53.93	27.38
HORVU1Hr1G064700.2	Barley	plastid	55.06	25.57
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	45.32	22.37
VIT_13s0320g00040.t01	Wine grape	vacuole	31.09	14.41
HORVU7Hr1G087370.1	Barley	cytosol	0.75	2.86
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, vacuole	1.12	1.96
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	0.75	1.68
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	1.12	1.42
GSMUA_Achr11P...	Banana	cytosol	0.37	1.05
GSMUA_Achr11P...	Banana	cytosol	0.0	0.0
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, vacuole	0.0	0.0

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
EntrezGene:100247688	wikigene:100247688	MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	InterPro:Beta_hexosaminidase_sua/sub
ProteinID:CCB48305	ProteinID:CCB48305.1	UniProt:F6H7W3	EMBL:FN595254	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004563	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_20_cat	InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	EntrezGene:LOC100247688
wikigene:LOC100247688	PFAM:PF00728	PFAM:PF14845	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF36
SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI000210983B	ArrayExpress:VIT_00s0220g00180	EnsemblPlantsGene:VIT_00s0220g00180
EnsemblPlants:VIT_00s0220g00180.t01	unigene:Vvi.24922	RefSeq:XP_002268354	RefSeq:XP_002268354.1	:	:

Description

No Description!

Coordinates

chrUn:+:14322005..14337797

Molecular Weight (calculated)

30490.5 Da

IEP (calculated)

6.385

GRAVY (calculated)

0.050

Length

267 amino acids

Sequence
(BLAST)

001: MGKIVKSFCF LVFFGVLVEG LNIWPMPNSV NHGHQIMYLS NDFALKSDGS KYNDASGILK DAFSRLLDVI EVDHVIDSNF SHFDPMAILH GIHVIVWSQN
101: DELQYGVDES YKLSIPSHGT QVYAHIEAQT VYGVLHGLQT FSQLCRFNLT NRAIEVHQVP WYIIDQPRFF YRGLLIDTSR HYLPLPIIKN VIDSMTYAKL
201: NVLHWHIVDT QSFPLEIPSF PKLWNGAYSI SERYTMADAA EIVSYAQRRG ISVLAEIDVP GHALSWY

Best Arabidopsis Sequence Match ( AT1G65590.1 )
(BLAST)

001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ

Arabidopsis Description

HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.