Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0340g00040.t01 | Wine grape | cytosol, mitochondrion, nucleus | 50.0 | 16.59 |
| CDY39278 | Canola | cytosol | 60.0 | 9.93 |
| TraesCS1D01G259600.1 | Wheat | golgi, vacuole | 70.0 | 9.33 |
| TraesCS1A01G259800.1 | Wheat | nucleus, unclear | 70.0 | 9.3 |
| TraesCS1B01G270100.1 | Wheat | golgi, vacuole | 68.57 | 9.13 |
| HORVU1Hr1G064700.2 | Barley | plastid | 74.29 | 9.04 |
| Zm00001d038196_P001 | Maize | nucleus | 62.86 | 8.32 |
| KXG22005 | Sorghum | golgi, vacuole | 62.86 | 8.27 |
| CDY07456 | Canola | vacuole | 60.0 | 7.87 |
| Bra004121.1-P | Field mustard | vacuole | 60.0 | 7.87 |
| AT1G65590.1 | Thale cress | vacuole | 58.57 | 7.66 |
| Solyc11g008810.1.1 | Tomato | extracellular, nucleus | 50.0 | 7.04 |
| HORVU3Hr1G090160.4 | Barley | endoplasmic reticulum, golgi, vacuole | 51.43 | 6.91 |
| PGSC0003DMT400041850 | Potato | extracellular | 50.0 | 6.59 |
| Os05t0415700-01 | Rice | extracellular | 48.57 | 6.4 |
| HORVU1Hr1G008250.12 | Barley | vacuole | 37.14 | 4.64 |
| VIT_00s0406g00010.t01 | Wine grape | cytosol, extracellular, vacuole | 5.71 | 3.36 |
| HORVU2Hr1G037480.2 | Barley | golgi, vacuole | 21.43 | 2.57 |
| HORVU4Hr1G067360.4 | Barley | plastid | 21.43 | 2.34 |
| GSMUA_Achr11P... | Banana | cytosol | 5.71 | 1.49 |
| VIT_00s0220g00180.t01 | Wine grape | vacuole | 2.86 | 0.75 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G087370.1 | EnsemblPlantsGene:HORVU7Hr1G087370 | PANTHER:PTHR22600 | PANTHER:PTHR22600:SF36 | UniParc:UPI000B4608D2 | UniProt:A0A287X7E6 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:526023208..526024187
Molecular Weight (calculated)
8005.8 Da
IEP (calculated)
8.670
GRAVY (calculated)
-0.256
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MRKLPLHSCC FENHQFTYCF EERLWTPVER LVKNPTMVTA RLAHFKCLLN ERGVAAAPLA GYGRTAPSEP
001: MRGSGAKIAG VLPLFMLFIA GTISAFEDIE RLRIWPLPAQ VSHGGRRMYL SGDFKLVTEG SKYGDASGIL KEGFDRMLGV VRLSHVISGD RNSSGTGGSA
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ
101: LLQGLHVIIS SSTDELEYGA DESYKLVVPS PEKPSYAQLE AKSVYGALHG LQTFSQLCHF NLKKKVIEIL MTPWNIIDQP RFSYRGLLID TSRHYLPLPV
201: IKNVIDSMTY AKLNVLHWHI VDTQSFPLEI PSYPKLWNGA YSSSQRYTFE DAAEIVNYAR RRGIHVLAEI DVPGHALSWG KGYPALWPSK NCQEPLDVSS
301: DFTFKVIDGI LSDFSKIFKF KFVHLGGDEV NTTCWSATPR IAQWLKKHRM SEKEAYQYFV LRAQKIALSH GYEIINWEET FINFGSKLNR KTVVHNWLNT
401: GLVENVTASG LRCIVSNQEF WYLDHIDAPW QGFYANEPFQ NITDKKQQSL VLGGEVCMWG EHIDASDIEQ TIWPRAAAAA ERLWTPYAKL AKNPNNVTTR
501: LAHFRCLLNQ RGVAAAPLVG GGRVVPFEPG SCLAQ
Arabidopsis Description
HEXO3Beta-hexosaminidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7S6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.