Factsheet for VIT_13s0320g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13814	Soybean	cytoskeleton, cytosol, vacuole	41.84	77.0
Bra032460.1-P	Field mustard	golgi, vacuole	68.06	67.35
PGSC0003DMT400079931	Potato	extracellular	66.84	66.96
CDY10018	Canola	golgi, vacuole	67.53	66.84
Solyc01g081610.2.1	Tomato	extracellular	66.67	66.78
KRH43642	Soybean	extracellular, golgi	67.53	66.38
AT1G05590.2	Thale cress	extracellular, golgi	66.84	66.38
KRH43598	Soybean	nucleus	65.45	64.44
CDX78174	Canola	golgi, vacuole	45.83	63.92
CDY06174	Canola	golgi, vacuole	41.32	61.34
GSMUA_Achr2P07820_001	Banana	endoplasmic reticulum, extracellular, golgi	55.9	60.41
Zm00001d021895_P001	Maize	extracellular	60.42	60.21
EER99593	Sorghum	extracellular, golgi, vacuole	60.42	59.59
TraesCS2D01G201900.1	Wheat	golgi, vacuole	59.38	58.76
TraesCS2A01G185800.1	Wheat	golgi, vacuole	59.38	58.76
TraesCS2B01G221500.1	Wheat	golgi, vacuole	59.38	58.66
HORVU2Hr1G037480.2	Barley	golgi, vacuole	59.2	58.49
Os07t0575500-00	Rice	golgi, vacuole	60.76	57.28
TraesCS4D01G242600.1	Wheat	plastid	56.77	54.68
Zm00001d028235_P001	Maize	extracellular, vacuole	56.6	54.42
Os03t0219400-01	Rice	golgi, vacuole	56.94	54.21
TraesCS4B01G243000.1	Wheat	plastid	56.25	54.18
OQU92989	Sorghum	extracellular, golgi	56.25	53.11
TraesCS4A01G065600.1	Wheat	vacuole	54.86	52.75
HORVU4Hr1G067360.4	Barley	plastid	56.77	51.01
VIT_00s0220g00180.t01	Wine grape	vacuole	14.41	31.09
VIT_00s0340g00040.t01	Wine grape	cytosol, mitochondrion, nucleus	10.42	28.44
VIT_13s0019g00040.t01	Wine grape	extracellular, golgi	25.52	27.17
VIT_00s0406g00010.t01	Wine grape	cytosol, extracellular, vacuole	4.34	21.01

Protein Annotations

KEGG:00511+3.2.1.52	KEGG:00513+3.2.1.52	KEGG:00520+3.2.1.52	KEGG:00531+3.2.1.52	KEGG:00603+3.2.1.52	KEGG:00604+3.2.1.52
EntrezGene:100240836	wikigene:100240836	MapMan:18.1.1.7.1	Gene3D:3.20.20.80	Gene3D:3.30.379.10	EMBL:AM438998
InterPro:Beta_hexosaminidase_sua/sub	ProteinID:CAN76146	ProteinID:CAN76146.1	ProteinID:CCB45212	ProteinID:CCB45212.1	UniProt:F6GZ26
EMBL:FN594984	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004563	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0102148	InterPro:Glyco_hydro_20_cat
InterPro:Glycoside_hydrolase_SF	InterPro:HEX_eukaryotic_N	InterPro:Hex-like_dom2	InterPro:IPR029018	EntrezGene:LOC100240836	wikigene:LOC100240836
PFAM:PF00728	PFAM:PF14845	PIRSF:PIRSF001093	PRINTS:PR00738	PANTHER:PTHR22600	PANTHER:PTHR22600:SF27
SUPFAM:SSF51445	SUPFAM:SSF55545	SignalP:SignalP-noTM	UniParc:UPI0001984943	ArrayExpress:VIT_13s0320g00040	EnsemblPlantsGene:VIT_13s0320g00040
EnsemblPlants:VIT_13s0320g00040.t01	RefSeq:XP_002266897	RefSeq:XP_002266897.1	SEG:seg	:	:

Description

Beta-hexosaminidase [Source:UniProtKB/TrEMBL;Acc:F6GZ26]

Coordinates

chr13:+:24350122..24352642

Molecular Weight (calculated)

63849.4 Da

IEP (calculated)

5.172

GRAVY (calculated)

-0.160

Length

576 amino acids

Sequence
(BLAST)

001: MAVSDKALFS IVFLFTAFVS SISASESQSQ INVWPKPRTF SWPSPQASLL SPNFSITSPN HQHLSSAVAR YLRLILTEHH HPLVTPTVNI TGPPLETLTI
101: IVSDLAAPLH HGVDESYTLI VPRGGAANLT AATVWGAMRG LETFSQIVWG DPLRVATGLF VWDSPLFGHR GVMLDTSRNY YGVEDILRTI GAMSANKLNV
201: FHWHITDSHS FPLLLPSEPD LAGKGSYGPQ MQYSPEDVKK IVEFGLEHGV RVLPEIDSPG HTGSWAEAYP EIVTCANMFW WPAEAEWADR LASEPGTGHL
301: NPLNPKTYQV FKNVIHDVAA LFPEPFYHSG ADEIIPGCWK ADPTIQTFLS NGGTLSQLLE IFINSTFPYI VSLNRTVVYW EDVLLDANVK VDPSMLPPEN
401: TILQTWNNGP NNTKKVVASG YRAIVSSSDF YYLDCGHGDF LGNDSQYDQK AGSNTENGGS WCGPFKTWQT IYNYDITYGL SDEEAKLVLG GEVALWSEQA
501: DPTVLDARIW PRASAMAEAL WSGNQDKTGM KRYADAMDRL NEWRYRMVAR GIGAEPIQPL WCIRNPGMCN TVHPFV

Best Arabidopsis Sequence Match ( AT1G05590.1 )
(BLAST)

001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ

Arabidopsis Description

HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.