Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 8
- plasma membrane 5
- golgi 6
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400079931 | Potato | extracellular | 96.7 | 96.7 |
KRH13814 | Soybean | cytoskeleton, cytosol, vacuole | 38.78 | 71.25 |
VIT_13s0320g00040.t01 | Wine grape | vacuole | 66.78 | 66.67 |
AT1G05590.2 | Thale cress | extracellular, golgi | 62.26 | 61.72 |
KRH43642 | Soybean | extracellular, golgi | 62.61 | 61.43 |
CDY10018 | Canola | golgi, vacuole | 62.09 | 61.34 |
Bra032460.1-P | Field mustard | golgi, vacuole | 61.57 | 60.82 |
CDX78174 | Canola | golgi, vacuole | 43.3 | 60.29 |
GSMUA_Achr2P07820_001 | Banana | endoplasmic reticulum, extracellular, golgi | 54.26 | 58.54 |
KRH43598 | Soybean | nucleus | 58.43 | 57.44 |
CDY06174 | Canola | golgi, vacuole | 37.91 | 56.19 |
TraesCS2D01G201900.1 | Wheat | golgi, vacuole | 56.87 | 56.19 |
TraesCS2A01G185800.1 | Wheat | golgi, vacuole | 55.48 | 54.81 |
HORVU2Hr1G037480.2 | Barley | golgi, vacuole | 55.3 | 54.55 |
TraesCS2B01G221500.1 | Wheat | golgi, vacuole | 55.13 | 54.37 |
Zm00001d021895_P001 | Maize | extracellular | 53.91 | 53.63 |
EER99593 | Sorghum | extracellular, golgi, vacuole | 54.26 | 53.42 |
Os03t0219400-01 | Rice | golgi, vacuole | 55.3 | 52.56 |
TraesCS4D01G242600.1 | Wheat | plastid | 54.43 | 52.34 |
Os07t0575500-00 | Rice | golgi, vacuole | 55.48 | 52.21 |
Zm00001d028235_P001 | Maize | extracellular, vacuole | 54.09 | 51.92 |
TraesCS4B01G243000.1 | Wheat | plastid | 53.91 | 51.84 |
OQU92989 | Sorghum | extracellular, golgi | 54.09 | 50.98 |
TraesCS4A01G065600.1 | Wheat | vacuole | 52.35 | 50.25 |
HORVU4Hr1G067360.4 | Barley | plastid | 53.57 | 48.05 |
Solyc11g008810.1.1 | Tomato | extracellular, nucleus | 25.04 | 28.97 |
Solyc05g054710.2.1 | Tomato | extracellular | 24.7 | 25.72 |
Protein Annotations
KEGG:00511+3.2.1.52 | KEGG:00513+3.2.1.52 | KEGG:00520+3.2.1.52 | KEGG:00531+3.2.1.52 | KEGG:00603+3.2.1.52 | KEGG:00604+3.2.1.52 |
MapMan:18.1.1.7.1 | Gene3D:3.20.20.80 | Gene3D:3.30.379.10 | ProteinID:ABY83274.1 | InterPro:Beta_hexosaminidase_sua/sub | UniProt:D3TI69 |
EMBL:EU244854 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004563 | GO:GO:0005575 |
GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0015929 |
GO:GO:0016020 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0035251 | GO:GO:0102148 |
InterPro:Glyco_hydro_20_cat | InterPro:Glycoside_hydrolase_SF | InterPro:HEX_eukaryotic_N | InterPro:Hex-like_dom2 | InterPro:IPR029018 | PFAM:PF00728 |
PFAM:PF14845 | PIRSF:PIRSF001093 | PRINTS:PR00738 | PANTHER:PTHR22600 | PANTHER:PTHR22600:SF27 | SUPFAM:SSF51445 |
SUPFAM:SSF55545 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc01g081610.2 | EnsemblPlants:Solyc01g081610.2.1 | TMHMM:TMhelix | UniParc:UPI0001CAF994 |
SEG:seg | : | : | : | : | : |
Description
Beta-hexosaminidase 2 [Source:Projected from Arabidopsis thaliana (AT1G05590) UniProtKB/Swiss-Prot;Acc:Q9SYK0]
Coordinates
chr1:-:80803091..80805899
Molecular Weight (calculated)
64026.8 Da
IEP (calculated)
5.803
GRAVY (calculated)
-0.175
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGEKTFSFF LLLFFILISQ TTATNYPINV WPKPTTFLWP NPKSIFLSTN FTISHPYHRY LTPAVDRYRH LILSEHHRPI ITPAINLTSS IPLQSLVISV
101: SDVTSPLAHG VNESYSLSTP SDGSASAYIS AATVWGAMRG LETFSQLVYG NPTRVSAGVY IHDLPIFTHR GVMLDTSRNF YGVDHLLRLI KAMSMNKLNV
201: FHWHITDSHS FPLVIPSEPE LAGKGAYSNE MMYSPADVQK IVEYGMEHGV RVLPEIDMPA HTGSWAEAYP EIVTCANMFW WPAGSSPALA AEPGTGQLNP
301: SIPKTYEVVK NVIQGTIAMF PDSLFHGGAD EINSDCWNTD LSVQKFVASN GTLSQLLEKF INNTLPEILS LNRTVVYWED VILSGNVKVN PSLLPPQNVI
401: MQTWNNGPNN TKQLVTSGYR VIVSSADYYY LDCGHGSFVG NDSRYDQPPG TDQGNGGSWC GPFKTWETIY NYDITYGLTD EEAPLVIGGE VALWSEQADS
501: TVMDSRIWPR ASAMAEALWS GNRDETGMKR YAEATDRLNE WRYRMVSRGI GAESIQPLWC LKNPGMCNTV HSFTS
101: SDVTSPLAHG VNESYSLSTP SDGSASAYIS AATVWGAMRG LETFSQLVYG NPTRVSAGVY IHDLPIFTHR GVMLDTSRNF YGVDHLLRLI KAMSMNKLNV
201: FHWHITDSHS FPLVIPSEPE LAGKGAYSNE MMYSPADVQK IVEYGMEHGV RVLPEIDMPA HTGSWAEAYP EIVTCANMFW WPAGSSPALA AEPGTGQLNP
301: SIPKTYEVVK NVIQGTIAMF PDSLFHGGAD EINSDCWNTD LSVQKFVASN GTLSQLLEKF INNTLPEILS LNRTVVYWED VILSGNVKVN PSLLPPQNVI
401: MQTWNNGPNN TKQLVTSGYR VIVSSADYYY LDCGHGSFVG NDSRYDQPPG TDQGNGGSWC GPFKTWETIY NYDITYGLTD EEAPLVIGGE VALWSEQADS
501: TVMDSRIWPR ASAMAEALWS GNRDETGMKR YAEATDRLNE WRYRMVSRGI GAESIQPLWC LKNPGMCNTV HSFTS
001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ
Arabidopsis Description
HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.