Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 6
- vacuole 4
- plasma membrane 4
- plastid 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10018 | Canola | golgi, vacuole | 82.93 | 82.65 |
| Bra032460.1-P | Field mustard | golgi, vacuole | 81.72 | 81.44 |
| CDX78174 | Canola | golgi, vacuole | 57.24 | 80.39 |
| CDY06174 | Canola | golgi, vacuole | 50.86 | 76.03 |
| KRH13814 | Soybean | cytoskeleton, cytosol, vacuole | 39.14 | 72.52 |
| VIT_13s0320g00040.t01 | Wine grape | vacuole | 66.38 | 66.84 |
| PGSC0003DMT400079931 | Potato | extracellular | 61.9 | 62.43 |
| Solyc01g081610.2.1 | Tomato | extracellular | 61.72 | 62.26 |
| KRH43642 | Soybean | extracellular, golgi | 62.24 | 61.6 |
| KRH43598 | Soybean | nucleus | 61.38 | 60.85 |
| GSMUA_Achr2P07820_001 | Banana | endoplasmic reticulum, extracellular, golgi | 53.97 | 58.72 |
| Zm00001d021895_P001 | Maize | extracellular | 55.52 | 55.71 |
| TraesCS2D01G201900.1 | Wheat | golgi, vacuole | 55.69 | 55.5 |
| TraesCS2A01G185800.1 | Wheat | golgi, vacuole | 55.0 | 54.81 |
| HORVU2Hr1G037480.2 | Barley | golgi, vacuole | 55.0 | 54.72 |
| TraesCS2B01G221500.1 | Wheat | golgi, vacuole | 54.83 | 54.55 |
| EER99593 | Sorghum | extracellular, golgi, vacuole | 54.83 | 54.45 |
| TraesCS4D01G242600.1 | Wheat | plastid | 55.34 | 53.68 |
| TraesCS4B01G243000.1 | Wheat | plastid | 54.83 | 53.18 |
| Zm00001d028235_P001 | Maize | extracellular, vacuole | 54.31 | 52.59 |
| Os07t0575500-00 | Rice | golgi, vacuole | 55.34 | 52.54 |
| TraesCS4A01G065600.1 | Wheat | vacuole | 53.97 | 52.25 |
| Os03t0219400-01 | Rice | golgi, vacuole | 54.31 | 52.07 |
| OQU92989 | Sorghum | extracellular, golgi | 54.14 | 51.48 |
| HORVU4Hr1G067360.4 | Barley | plastid | 54.83 | 49.61 |
| AT1G65590.1 | Thale cress | vacuole | 26.9 | 29.16 |
| AT3G55260.1 | Thale cress | golgi, vacuole | 25.52 | 27.36 |
Protein Annotations
| KEGG:00511+3.2.1.52 | KEGG:00513+3.2.1.52 | KEGG:00520+3.2.1.52 | KEGG:00531+3.2.1.52 | KEGG:00603+3.2.1.52 | KEGG:00604+3.2.1.52 |
| MapMan:18.1.1.7.1 | Gene3D:3.20.20.80 | Gene3D:3.30.379.10 | EntrezGene:837064 | ProteinID:AAD30612.1 | ProteinID:AEE27861.1 |
| EMBL:AK229119 | ProteinID:ANM60833.1 | ProteinID:ANM60834.1 | ArrayExpress:AT1G05590 | EnsemblPlantsGene:AT1G05590 | RefSeq:AT1G05590 |
| TAIR:AT1G05590 | RefSeq:AT1G05590-TAIR-G | EnsemblPlants:AT1G05590.2 | Unigene:At.42389 | InterPro:Beta_hexosaminidase_sua/sub | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004563 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0015929 | GO:GO:0016020 | GO:GO:0016740 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0035251 | GO:GO:0102148 | InterPro:Glyco_hydro_20_cat | InterPro:Glycoside_hydrolase_SF |
| Symbol:HEXO2 | InterPro:HEX_eukaryotic_N | InterPro:Hex-like_dom2 | InterPro:IPR029018 | RefSeq:NP_001318927.1 | RefSeq:NP_001323090.1 |
| RefSeq:NP_172050.1 | PFAM:PF00728 | PFAM:PF14845 | PIRSF:PIRSF001093 | PRINTS:PR00738 | PANTHER:PTHR22600 |
| PANTHER:PTHR22600:SF27 | UniProt:Q9SYK0 | SUPFAM:SSF51445 | SUPFAM:SSF55545 | TMHMM:TMhelix | UniParc:UPI00000A6C4C |
| SEG:seg | : | : | : | : | : |
Description
HEXO2Beta-hexosaminidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYK0]
Coordinates
chr1:+:1669350..1671902
Molecular Weight (calculated)
64994.6 Da
IEP (calculated)
6.365
GRAVY (calculated)
-0.145
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ
101: VTVTDFSLPL HHGVDESYKL SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT SRNYYGVDDI MRTIKAMSAN
201: KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG
301: TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL
401: PKEHTILQTW NNGPENTKRI VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL LNEEERKLVL GGEVALWSEQ
501: ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.